RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 KRTAP4-8A0A0G2JLE6 195 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 FAM86C2PA6NEL3 165 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 DBX1A6NMT0 343 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 CLEC3AO75596 197 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 PRAMEF1O95521 474 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 EFEMP2O95967 443 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 ACRP10323 421 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 RACK1P63244 317 aaKnown RBP7.59□□□□□ -1.19
CHD9-206ENST00000562791 SYDE1Q6ZW31 735 aaPredicted RBP7.59□□□□□ -1.19
CHD9-206ENST00000562791 TCTN2Q96GX1 697 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 SLC9A7Q96T83 725 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 PRDM14Q9GZV8 571 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 ASCC2Q9H1I8 757 aaPredicted RBP7.59□□□□□ -1.19
CHD9-206ENST00000562791 ZNRF3Q9ULT6 936 aa7.59□□□□□ -1.19
CHD9-206ENST00000562791 FITM1A5D6W6 292 aa7.58□□□□□ -1.2
CHD9-206ENST00000562791 CCNFP41002 786 aa7.58□□□□□ -1.2
CHD9-206ENST00000562791 GALK1P51570 392 aa7.58□□□□□ -1.2
CHD9-206ENST00000562791 BBS9Q3SYG4 887 aa7.58□□□□□ -1.2
CHD9-206ENST00000562791 DAGLBQ8NCG7 672 aa7.58□□□□□ -1.2
CHD9-206ENST00000562791 ENOX1Q8TC92 643 aaKnown RBP7.58□□□□□ -1.2
CHD9-206ENST00000562791 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
CHD9-206ENST00000562791 DHX38Q92620 1227 aaKnown RBP7.58□□□□□ -1.2
CHD9-206ENST00000562791 TMEM82A0PJX8 343 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 NOTOA8MTQ0 251 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 TSPAN15O95858 294 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 NR0B2Q15466 257 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 LRRFIP1Q32MZ4 808 aaKnown RBP7.57□□□□□ -1.2
CHD9-206ENST00000562791 ZPBP2Q6X784 338 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 LILRA2Q8N149 483 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 OXR1Q8N573 874 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 FBXO15Q8NCQ5 510 aaPredicted RBP7.57□□□□□ -1.2
CHD9-206ENST00000562791 BHLHE22Q8NFJ8 381 aaPredicted RBP7.57□□□□□ -1.2
CHD9-206ENST00000562791 RNF34Q969K3 372 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 MKRN2Q9H000 416 aaKnown RBP7.57□□□□□ -1.2
CHD9-206ENST00000562791 EPB41L4BQ9H329 900 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 TCFL5Q9UL49 500 aa7.57□□□□□ -1.2
CHD9-206ENST00000562791 C9IYK1 514 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 SIGLEC6O43699 453 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 PSPNO60542 156 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 USP2O75604 605 aaPredicted RBP7.56□□□□□ -1.2
CHD9-206ENST00000562791 RPL10P27635 214 aaKnown RBP7.56□□□□□ -1.2
CHD9-206ENST00000562791 DUSP4Q13115 394 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 RNF111Q6ZNA4 994 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 WAPLQ7Z5K2 1190 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 HOMEZQ8IX15 550 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 ZNF655Q8N720 491 aaPredicted RBP7.56□□□□□ -1.2
CHD9-206ENST00000562791 ANKS4BQ8N8V4 417 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 SHISA4Q96DD7 197 aa7.56□□□□□ -1.2
CHD9-206ENST00000562791 DCP1AQ9NPI6 582 aaPredicted RBP7.56□□□□□ -1.2
CHD9-206ENST00000562791 DDX41Q9UJV9 622 aaKnown RBP7.56□□□□□ -1.2
CHD9-206ENST00000562791 FKTNO75072 461 aa7.55□□□□□ -1.2
CHD9-206ENST00000562791 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
CHD9-206ENST00000562791 GFOD1Q9NXC2 390 aa7.55□□□□□ -1.2
CHD9-206ENST00000562791 GPR160Q9UJ42 338 aa7.55□□□□□ -1.2
CHD9-206ENST00000562791 PPT2Q9UMR5 302 aa7.55□□□□□ -1.2
CHD9-206ENST00000562791 MEIS1O00470 390 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 SHOXO15266 292 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 SYPP08247 313 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 VAMP1P23763 118 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 CTSKP43235 329 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 RAP1GAPP47736 663 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 CHRNEQ04844 493 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 METTL16Q86W50 562 aaKnown RBP7.54□□□□□ -1.2
CHD9-206ENST00000562791 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 LINC00116Q8NCU8 138 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 SYTL4Q96C24 671 aaPredicted RBP7.54□□□□□ -1.2
CHD9-206ENST00000562791 INTS4Q96HW7 963 aaKnown RBP7.54□□□□□ -1.2
CHD9-206ENST00000562791 MAP6Q96JE9 813 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 CHST7Q9NS84 486 aa7.54□□□□□ -1.2
CHD9-206ENST00000562791 YBX2Q9Y2T7 364 aaKnown RBP7.54□□□□□ -1.2
CHD9-206ENST00000562791 PCBP3P57721 371 aaKnown RBP7.53□□□□□ -1.2
CHD9-206ENST00000562791 ZYXQ15942 572 aaKnown RBP7.53□□□□□ -1.2
CHD9-206ENST00000562791 TDRD10Q5VZ19 366 aaKnown RBP7.53□□□□□ -1.2
CHD9-206ENST00000562791 SPOCD1Q6ZMY3 1216 aa7.53□□□□□ -1.2
CHD9-206ENST00000562791 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
CHD9-206ENST00000562791 C1QL4Q86Z23 238 aa7.53□□□□□ -1.2
CHD9-206ENST00000562791 HHIPL1Q96JK4 782 aa7.53□□□□□ -1.2
CHD9-206ENST00000562791 FERD3LQ96RJ6 166 aa7.53□□□□□ -1.2
CHD9-206ENST00000562791 SUCOQ9UBS9 1254 aaKnown RBP7.53□□□□□ -1.2
CHD9-206ENST00000562791 ZMYM5Q9UJ78 669 aa7.53□□□□□ -1.2
CHD9-206ENST00000562791 PCDHB12Q9Y5F1 795 aa7.53□□□□□ -1.2
CHD9-206ENST00000562791 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.21
CHD9-206ENST00000562791 TRIM26Q12899 539 aaPredicted RBP7.52□□□□□ -1.21
CHD9-206ENST00000562791 PAK2Q13177 524 aa7.52□□□□□ -1.21
CHD9-206ENST00000562791 AUHQ13825 339 aaKnown RBP7.52□□□□□ -1.21
CHD9-206ENST00000562791 CRTC3Q6UUV7 619 aa7.52□□□□□ -1.21
CHD9-206ENST00000562791 CCDC81Q6ZN84 652 aa7.52□□□□□ -1.21
CHD9-206ENST00000562791 SPPL2CQ8IUH8 684 aa7.52□□□□□ -1.21
CHD9-206ENST00000562791 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
CHD9-206ENST00000562791 CWC22Q9HCG8 908 aaKnown RBP7.52□□□□□ -1.21
CHD9-206ENST00000562791 FBXL21Q9UKT6 434 aa7.52□□□□□ -1.21
CHD9-206ENST00000562791 ETV2O00321 342 aaPredicted RBP7.51□□□□□ -1.21
CHD9-206ENST00000562791 IMPDH2P12268 514 aa7.51□□□□□ -1.21
CHD9-206ENST00000562791 CEBPAP49715 358 aaPredicted RBP7.51□□□□□ -1.21
CHD9-206ENST00000562791 FBXW10Q5XX13 1052 aa7.51□□□□□ -1.21
CHD9-206ENST00000562791 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
CHD9-206ENST00000562791 ZNF605Q86T29 641 aa7.51□□□□□ -1.21
CHD9-206ENST00000562791 NLRX1Q86UT6 975 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms