RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 WDR44Q5JSH3 913 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 GNASQ5JWF2 1037 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 NBPF12Q5TAG4 269 aaPredicted RBP7.09□□□□□ -1.27
CDH13-206ENST00000562601 APOBEC3HQ6NTF7 200 aaKnown RBP7.09□□□□□ -1.27
CDH13-206ENST00000562601 PRICKLE2Q7Z3G6 844 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 SAPCD2Q86UD0 394 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 APOBEC3FQ8IUX4 373 aaKnown RBP7.09□□□□□ -1.27
CDH13-206ENST00000562601 EXOC6Q8TAG9 804 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 ZSCAN10Q96SZ4 725 aaPredicted RBP7.09□□□□□ -1.27
CDH13-206ENST00000562601 TMEM39BQ9GZU3 492 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 RAI14Q9P0K7 980 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 RBM19Q9Y4C8 960 aaKnown RBP7.09□□□□□ -1.27
CDH13-206ENST00000562601 DAGLAQ9Y4D2 1042 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 PCDHGA11Q9Y5H2 935 aa7.09□□□□□ -1.27
CDH13-206ENST00000562601 MAST3O60307 1309 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 WDR33Q9C0J8 1336 aaKnown RBP7.08□□□□□ -1.28
CDH13-206ENST00000562601 SALL1Q9NSC2 1324 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 RASSF10A6NK89 507 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 SPATA31C2B4DYI2 1134 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 H3BM21 787 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 WIPF1O43516 503 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 RAB11FIP3O75154 756 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 WFS1O76024 890 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 CYP2E1P05181 493 aaPredicted RBP7.08□□□□□ -1.28
CDH13-206ENST00000562601 IFIT2P09913 472 aaKnown RBP7.08□□□□□ -1.28
CDH13-206ENST00000562601 ZAP70P43403 619 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 HDLBPQ00341 1268 aaKnown RBP7.08□□□□□ -1.28
CDH13-206ENST00000562601 MECOMQ03112 1051 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 RASA3Q14644 834 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 TLR1Q15399 786 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 SPTY2D1Q68D10 685 aaPredicted RBP7.08□□□□□ -1.28
CDH13-206ENST00000562601 TMEM214Q6NUQ4 689 aaKnown RBP7.08□□□□□ -1.28
CDH13-206ENST00000562601 CDC42EP5Q6NZY7 148 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 HHIPL2Q6UWX4 724 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 DZIP1Q86YF9 867 aaKnown RBP7.08□□□□□ -1.28
CDH13-206ENST00000562601 ZNF384Q8TF68 577 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 KIF1BPQ96EK5 621 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 CAPNS2Q96L46 248 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 ZDHHC15Q96MV8 337 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 ZIC5Q96T25 663 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 PIH1D3Q9NQM4 214 aaKnown RBP7.08□□□□□ -1.28
CDH13-206ENST00000562601 USP40Q9NVE5 1235 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 SUGT1Q9Y2Z0 365 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 HRH3Q9Y5N1 445 aa7.08□□□□□ -1.28
CDH13-206ENST00000562601 SLC35F4A4IF30 521 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 NF2P35240 595 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 BTDP43251 543 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 ZNF157P51786 506 aaPredicted RBP7.07□□□□□ -1.28
CDH13-206ENST00000562601 TCP10Q12799 353 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 RGMBQ6NW40 437 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 ZFPM1Q8IX07 1006 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 CLASRPQ8N2M8 674 aaKnown RBP7.07□□□□□ -1.28
CDH13-206ENST00000562601 ZGPATQ8N5A5 531 aaKnown RBP7.07□□□□□ -1.28
CDH13-206ENST00000562601 CCDC155Q8N6L0 562 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 JMYQ8N9B5 988 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 IRF7Q92985 503 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 NSUN4Q96CB9 384 aaKnown RBP7.07□□□□□ -1.28
CDH13-206ENST00000562601 MRIQ9BWK5 157 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 LRRCC1Q9C099 1032 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 ANTXR1Q9H6X2 564 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 DCTPP1Q9H773 170 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 DNAAF2Q9NVR5 837 aaKnown RBP7.07□□□□□ -1.28
CDH13-206ENST00000562601 LRP2BPQ9P2M1 347 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 ANGEL1Q9UNK9 670 aaKnown RBP7.07□□□□□ -1.28
CDH13-206ENST00000562601 SSC5DA1L4H1 1573 aa7.07□□□□□ -1.28
CDH13-206ENST00000562601 PDS5AQ29RF7 1337 aaKnown RBP7.06□□□□□ -1.28
CDH13-206ENST00000562601 PAPPA2Q9BXP8 1791 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 PPFIA3O75145 1194 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 TNNI2P48788 182 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 NFIAQ12857 509 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 PICALMQ13492 652 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 TSHZ3Q63HK5 1081 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 ADGRA1Q86SQ6 560 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 RHBDD1Q8TEB9 315 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 CCDC97Q96F63 343 aaPredicted RBP7.06□□□□□ -1.28
CDH13-206ENST00000562601 EDC3Q96F86 508 aaKnown RBP7.06□□□□□ -1.28
CDH13-206ENST00000562601 TEPSINQ96N21 525 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 DNAJC2Q99543 621 aaKnown RBP7.06□□□□□ -1.28
CDH13-206ENST00000562601 BOLA2Q9H3K6 86 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 TMOD2Q9NZR1 351 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 CDK5RAP2Q96SN8 1893 aa7.06□□□□□ -1.28
CDH13-206ENST00000562601 MROH7-TTC4A0A0A0MT08 1334 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 FAM155AB1AL88 458 aaPredicted RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 TMEM229AB2RXF0 380 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 GOLIM4O00461 696 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 USP2O75604 605 aaPredicted RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 IDH1O75874 414 aaKnown RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 MAP4K4O95819 1239 aaPredicted RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 HSPA1AP0DMV8 641 aaKnown RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 HSPA1BP0DMV9 641 aaKnown RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 SLURP2P0DP57 97 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 RASA1P20936 1047 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 ECE1P42892 770 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 RGS3P49796 1198 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 SMTNP53814 917 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 DYNLL1P63167 89 aaKnown RBP7.05□□□□□ -1.28
CDH13-206ENST00000562601 GSTO1P78417 241 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 TNFAIP1Q13829 316 aa7.05□□□□□ -1.28
CDH13-206ENST00000562601 SUPT20HL1Q3ZLR7 823 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms