RNA–Protein interactions for RNA: ENST00000562431.1

LPCAT4-203, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 341 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-203ENST00000562431 LRRC2Q9BYS8 371 aa13.81□□□□□ -0.2
LPCAT4-203ENST00000562431 TANGO6Q9C0B7 1094 aa13.81□□□□□ -0.2
LPCAT4-203ENST00000562431 RPAP3Q9H6T3 665 aaPredicted RBP13.81□□□□□ -0.2
LPCAT4-203ENST00000562431 PNMA3Q9UL41 463 aa13.81□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L15C9J2P7 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L13C9JLJ4 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L11C9JVI0 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L18D6R9N7 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L22D6RA61 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L17D6RBQ6 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L19D6RCP7 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L20D6RJB6 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 WDR46O15213 610 aaKnown RBP13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 ANAPC15P60006 121 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 USP17L24Q0WX57 530 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 SEC23AQ15436 765 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 KIAA1755Q5JYT7 1200 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 FAM83BQ5T0W9 1011 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 NFXL1Q6ZNB6 911 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 PNMA1Q8ND90 353 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 TMEM87BQ96K49 555 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 TCEANC2Q96MN5 208 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 PARK7Q99497 189 aaKnown RBP13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 BACH2Q9BYV9 841 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 ZCCHC17Q9NP64 241 aaKnown RBP13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 SLC45A1Q9Y2W3 748 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 TRIM17Q9Y577 477 aa13.8□□□□□ -0.2
LPCAT4-203ENST00000562431 SH2B2O14492 632 aaPredicted RBP13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 CPA1P15085 419 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 RPS6KB1P23443 525 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 SLC1A4P43007 532 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 COL9A3Q14050 684 aaPredicted RBP13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 CCDC96Q2M329 555 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 IGDCC4Q8TDY8 1250 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 SMCR8Q8TEV9 937 aaPredicted RBP13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 ANKS1AQ92625 1134 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 NUP88Q99567 741 aaPredicted RBP13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 MTA3Q9BTC8 594 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 ZFYVE28Q9HCC9 887 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 CYP46A1Q9Y6A2 500 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 WDR19Q8NEZ3 1342 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 SZT2Q5T011 3432 aa13.79□□□□□ -0.2
LPCAT4-203ENST00000562431 TRIOBPQ9H2D6 2365 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 CCDC69A6NI79 296 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 FLOT1O75955 427 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 CYP2C8P10632 490 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 BMP3P12645 472 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 EXOSC10Q01780 885 aaKnown RBP13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 IKQ13123 557 aaPredicted RBP13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 CATSPERGQ6ZRH7 1159 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 RUFY3Q7L099 469 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 TMTC2Q8N394 836 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 DCAF4Q8WV16 495 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 ARMC5Q96C12 935 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 GMCL1Q96IK5 515 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 UPF3BQ9BZI7 483 aaKnown RBP13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 TM6SF1Q9BZW5 370 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 ASCC2Q9H1I8 757 aaPredicted RBP13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 LY9Q9HBG7 655 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 SENP2Q9HC62 589 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 ZSWIM6Q9HCJ5 1215 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 LOC285556D6RIA3 1793 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 ZSWIM8A7E2V4 1837 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 PTPRFP10586 1907 aa13.78□□□□□ -0.2
LPCAT4-203ENST00000562431 RANBP2P49792 3224 aaKnown RBP13.77□□□□□ -0.21
LPCAT4-203ENST00000562431 CRHR2Q13324 411 aa13.77□□□□□ -0.21
LPCAT4-203ENST00000562431 Q6ZUG5 572 aa13.77□□□□□ -0.21
LPCAT4-203ENST00000562431 RASGRP2Q7LDG7 609 aa13.77□□□□□ -0.21
LPCAT4-203ENST00000562431 CATIPQ7Z7H3 387 aa13.77□□□□□ -0.21
LPCAT4-203ENST00000562431 PTPN22Q9Y2R2 807 aa13.77□□□□□ -0.21
LPCAT4-203ENST00000562431 MYH4Q9Y623 1939 aa13.77□□□□□ -0.21
LPCAT4-203ENST00000562431 FRMPD2Q68DX3 1309 aaPredicted RBP13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 TMEM232C9JQI7 657 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 PDHBP11177 359 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 LIFRP42702 1097 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 FXR1P51114 621 aaKnown RBP eCLIP13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 KCTD1Q719H9 257 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 CD99L2Q8TCZ2 262 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 NUP133Q8WUM0 1156 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 P2RX7Q99572 595 aaKnown RBP13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 GPCPD1Q9NPB8 672 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 PDRG1Q9NUG6 133 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 FEM1BQ9UK73 627 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 NAP1L2Q9ULW6 460 aaPredicted RBP13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 SLC12A7Q9Y666 1083 aa13.76□□□□□ -0.21
LPCAT4-203ENST00000562431 DDAH1O94760 285 aa13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 PARP1P09874 1014 aaKnown RBP13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 RBM25P49756 843 aaKnown RBP13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 STAT2P52630 851 aa13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 HERVK_113P62684 666 aa13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 COG2Q14746 738 aa13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 ZNF654Q8IZM8 581 aa13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 GTF3C2Q8WUA4 911 aaPredicted RBP13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
LPCAT4-203ENST00000562431 BRF1Q92994 677 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms