RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 CKAP2LQ8IYA6 745 aa9.57□□□□□ -0.88
SMG1-204ENST00000561940 GPR62Q9BZJ7 368 aa9.57□□□□□ -0.88
SMG1-204ENST00000561940 TRIT1Q9H3H1 467 aaKnown RBP9.57□□□□□ -0.88
SMG1-204ENST00000561940 PIF1Q9H611 641 aa9.57□□□□□ -0.88
SMG1-204ENST00000561940 SRFP11831 508 aa9.56□□□□□ -0.88
SMG1-204ENST00000561940 ZYXQ15942 572 aaKnown RBP9.56□□□□□ -0.88
SMG1-204ENST00000561940 LSRQ86X29 649 aaPredicted RBP9.56□□□□□ -0.88
SMG1-204ENST00000561940 FAM86C1Q9NVL1 165 aa9.56□□□□□ -0.88
SMG1-204ENST00000561940 GIPRP48546 466 aa9.55□□□□□ -0.88
SMG1-204ENST00000561940 RNF4P78317 190 aa9.55□□□□□ -0.88
SMG1-204ENST00000561940 GIMAP6Q6P9H5 292 aa9.55□□□□□ -0.88
SMG1-204ENST00000561940 TMC3Q7Z5M5 1100 aa9.55□□□□□ -0.88
SMG1-204ENST00000561940 TSPYL5Q86VY4 417 aaPredicted RBP9.55□□□□□ -0.88
SMG1-204ENST00000561940 MKRN2Q9H000 416 aaKnown RBP9.55□□□□□ -0.88
SMG1-204ENST00000561940 OSBPL2Q9H1P3 480 aa9.55□□□□□ -0.88
SMG1-204ENST00000561940 LMCD1Q9NZU5 365 aa9.55□□□□□ -0.88
SMG1-204ENST00000561940 PRKAG3Q9UGI9 489 aa9.55□□□□□ -0.88
SMG1-204ENST00000561940 DUSP13Q9UII6 198 aa9.55□□□□□ -0.88
SMG1-204ENST00000561940 KLF4O43474 513 aa9.54□□□□□ -0.88
SMG1-204ENST00000561940 NBPF9Q3BBW0 867 aa9.54□□□□□ -0.88
SMG1-204ENST00000561940 TDRD10Q5VZ19 366 aaKnown RBP9.54□□□□□ -0.88
SMG1-204ENST00000561940 ASCC2Q9H1I8 757 aaPredicted RBP9.54□□□□□ -0.88
SMG1-204ENST00000561940 ZSWIM4Q9H7M6 989 aa9.54□□□□□ -0.88
SMG1-204ENST00000561940 SLAMF8Q9P0V8 285 aa9.54□□□□□ -0.88
SMG1-204ENST00000561940 MINPP1Q9UNW1 487 aa9.54□□□□□ -0.88
SMG1-204ENST00000561940 LTKP29376 864 aa9.53□□□□□ -0.88
SMG1-204ENST00000561940 CCNFP41002 786 aa9.53□□□□□ -0.88
SMG1-204ENST00000561940 NMIQ13287 307 aaPredicted RBP9.53□□□□□ -0.88
SMG1-204ENST00000561940 SERINC3Q13530 473 aa9.53□□□□□ -0.88
SMG1-204ENST00000561940 BMS1Q14692 1282 aaKnown RBP9.53□□□□□ -0.88
SMG1-204ENST00000561940 INTS3Q68E01 1043 aaKnown RBP9.53□□□□□ -0.88
SMG1-204ENST00000561940 UNC5AQ6ZN44 842 aa9.53□□□□□ -0.88
SMG1-204ENST00000561940 TMPRSS7Q7RTY8 843 aa9.53□□□□□ -0.88
SMG1-204ENST00000561940 TM9SF2Q99805 663 aa9.53□□□□□ -0.88
SMG1-204ENST00000561940 PRDM14Q9GZV8 571 aa9.53□□□□□ -0.88
SMG1-204ENST00000561940 FBXL21Q9UKT6 434 aa9.53□□□□□ -0.88
SMG1-204ENST00000561940 DNAJC25-GNG10A0A024R161 153 aa9.52□□□□□ -0.89
SMG1-204ENST00000561940 C9IYK1 514 aa9.52□□□□□ -0.89
SMG1-204ENST00000561940 TP53P04637 393 aaPredicted RBP9.52□□□□□ -0.89
SMG1-204ENST00000561940 GUCY2CP25092 1073 aa9.52□□□□□ -0.89
SMG1-204ENST00000561940 EGR3Q06889 387 aa9.52□□□□□ -0.89
SMG1-204ENST00000561940 GAB4Q2WGN9 574 aa9.52□□□□□ -0.89
SMG1-204ENST00000561940 RALGPS1Q5JS13 557 aa9.52□□□□□ -0.89
SMG1-204ENST00000561940 RBBP8NLQ8NC74 664 aaPredicted RBP9.52□□□□□ -0.89
SMG1-204ENST00000561940 PCDHA11Q9Y5I1 949 aa9.52□□□□□ -0.89
SMG1-204ENST00000561940 MEIS1O00470 390 aa9.51□□□□□ -0.89
SMG1-204ENST00000561940 SMARCA5O60264 1052 aaPredicted RBP9.51□□□□□ -0.89
SMG1-204ENST00000561940 CELF2-AS1Q8N7Q2 184 aa9.51□□□□□ -0.89
SMG1-204ENST00000561940 ADAMTS10Q9H324 1103 aa9.51□□□□□ -0.89
SMG1-204ENST00000561940 SUCOQ9UBS9 1254 aaKnown RBP9.51□□□□□ -0.89
SMG1-204ENST00000561940 RAB33AQ14088 237 aa9.5□□□□□ -0.89
SMG1-204ENST00000561940 PPP2R5EQ16537 467 aa9.5□□□□□ -0.89
SMG1-204ENST00000561940 SOGA3Q5TF21 947 aa9.5□□□□□ -0.89
SMG1-204ENST00000561940 TTC6Q86TZ1 520 aa9.5□□□□□ -0.89
SMG1-204ENST00000561940 CCDC144CPQ8IYA2 1237 aa9.5□□□□□ -0.89
SMG1-204ENST00000561940 DHRS1Q96LJ7 313 aa9.5□□□□□ -0.89
SMG1-204ENST00000561940 ALPK1Q96QP1 1244 aa9.5□□□□□ -0.89
SMG1-204ENST00000561940 TRIM55Q9BYV6 548 aa9.5□□□□□ -0.89
SMG1-204ENST00000561940 PAPLNO95428 1278 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 HK2P52789 917 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 NBPF6Q5VWK0 638 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 PPFIBP1Q86W92 1011 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 KRTAP1-3Q8IUG1 177 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 NBPF4Q96M43 638 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 GFOD1Q9NXC2 390 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 PCDHB10Q9UN67 800 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 CTNND2Q9UQB3 1225 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 LTBP3Q9NS15 1303 aa9.49□□□□□ -0.89
SMG1-204ENST00000561940 PRAMEF1O95521 474 aa9.48□□□□□ -0.89
SMG1-204ENST00000561940 AUHQ13825 339 aaKnown RBP9.48□□□□□ -0.89
SMG1-204ENST00000561940 TNNI3KQ59H18 835 aa9.48□□□□□ -0.89
SMG1-204ENST00000561940 DCAF15Q66K64 600 aa9.48□□□□□ -0.89
SMG1-204ENST00000561940 TAB3Q8N5C8 712 aaPredicted RBP9.48□□□□□ -0.89
SMG1-204ENST00000561940 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
SMG1-204ENST00000561940 MICAL1Q8TDZ2 1067 aa9.48□□□□□ -0.89
SMG1-204ENST00000561940 HDAC8Q9BY41 377 aa9.48□□□□□ -0.89
SMG1-204ENST00000561940 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
SMG1-204ENST00000561940 ACTR10Q9NZ32 417 aa9.48□□□□□ -0.89
SMG1-204ENST00000561940 CDK11AQ9UQ88 783 aaPredicted RBP9.48□□□□□ -0.89
SMG1-204ENST00000561940 ITGB5P18084 799 aa9.47□□□□□ -0.89
SMG1-204ENST00000561940 PMS1P54277 932 aaKnown RBP9.47□□□□□ -0.89
SMG1-204ENST00000561940 AXDND1Q5T1B0 1012 aaPredicted RBP9.47□□□□□ -0.89
SMG1-204ENST00000561940 FYB2Q5VWT5 728 aa9.47□□□□□ -0.89
SMG1-204ENST00000561940 ATG4DQ86TL0 474 aaPredicted RBP9.47□□□□□ -0.89
SMG1-204ENST00000561940 USHBP1Q8N6Y0 703 aa9.47□□□□□ -0.89
SMG1-204ENST00000561940 TCTN2Q96GX1 697 aa9.47□□□□□ -0.89
SMG1-204ENST00000561940 FOXP3Q9BZS1 431 aa9.47□□□□□ -0.89
SMG1-204ENST00000561940 ST7Q9NRC1 585 aa9.47□□□□□ -0.89
SMG1-204ENST00000561940 R3HCC1Q9Y3T6 440 aaKnown RBP9.47□□□□□ -0.89
SMG1-204ENST00000561940 PCDHB12Q9Y5F1 795 aa9.47□□□□□ -0.89
SMG1-204ENST00000561940 A0A1W2PQH9 124 aa9.46□□□□□ -0.9
SMG1-204ENST00000561940 BIN1O00499 593 aa9.46□□□□□ -0.9
SMG1-204ENST00000561940 ERVFC1P60507 584 aa9.46□□□□□ -0.9
SMG1-204ENST00000561940 SYTL5Q8TDW5 730 aaPredicted RBP9.46□□□□□ -0.9
SMG1-204ENST00000561940 SSU72P8A0A1W2PR75 194 aa9.45□□□□□ -0.9
SMG1-204ENST00000561940 CCDC85CA6NKD9 419 aa9.45□□□□□ -0.9
SMG1-204ENST00000561940 FKTNO75072 461 aa9.45□□□□□ -0.9
SMG1-204ENST00000561940 LARP1BQ659C4 914 aaKnown RBP9.45□□□□□ -0.9
SMG1-204ENST00000561940 C7orf61Q8IZ16 206 aa9.45□□□□□ -0.9
SMG1-204ENST00000561940 FAM177A1Q8N128 213 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms