RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 TMEM59LQ9UK28 342 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 PPT2Q9UMR5 302 aa4.03□□□□□ -1.76
CHD9-204ENST00000561869 CLEC3AO75596 197 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 HPXP02790 462 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 ZGLP1P0C6A0 271 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 IMPDH2P12268 514 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 GJA8P48165 433 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 SOX9P48436 509 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 KSR1Q8IVT5 923 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 DAGLBQ8NCG7 672 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 LIN37Q96GY3 246 aaPredicted RBP4.02□□□□□ -1.77
CHD9-204ENST00000561869 CCDC120Q96HB5 630 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 KIRREL1Q96J84 757 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 SLC6A18Q96N87 628 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 G6PC3Q9BUM1 346 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 PRDM14Q9GZV8 571 aa4.02□□□□□ -1.77
CHD9-204ENST00000561869 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.02□□□□□ -1.77
CHD9-204ENST00000561869 C9IYK1 514 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 SHOXO15266 292 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 GLI1P08151 1106 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 LTKP29376 864 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 HK2P52789 917 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 COL9A2Q14055 689 aaPredicted RBP4.01□□□□□ -1.77
CHD9-204ENST00000561869 ZYXQ15942 572 aaKnown RBP4.01□□□□□ -1.77
CHD9-204ENST00000561869 KCNMB1Q16558 191 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 RUFY4Q6ZNE9 571 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 PPFIBP1Q86W92 1011 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 LSRQ86X29 649 aaPredicted RBP4.01□□□□□ -1.77
CHD9-204ENST00000561869 ZNF655Q8N720 491 aaPredicted RBP4.01□□□□□ -1.77
CHD9-204ENST00000561869 LINC01599Q8WXQ3 324 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 TCTN2Q96GX1 697 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 FERD3LQ96RJ6 166 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 TM9SF2Q99805 663 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 SUCOQ9UBS9 1254 aaKnown RBP4.01□□□□□ -1.77
CHD9-204ENST00000561869 MINPP1Q9UNW1 487 aa4.01□□□□□ -1.77
CHD9-204ENST00000561869 TMEM82A0PJX8 343 aa4□□□□□ -1.77
CHD9-204ENST00000561869 FAM86C2PA6NEL3 165 aa4□□□□□ -1.77
CHD9-204ENST00000561869 LRRC10BA6NIK2 292 aa4□□□□□ -1.77
CHD9-204ENST00000561869 NOTOA8MTQ0 251 aa4□□□□□ -1.77
CHD9-204ENST00000561869 SIGLEC6O43699 453 aa4□□□□□ -1.77
CHD9-204ENST00000561869 PRAMEF1O95521 474 aa4□□□□□ -1.77
CHD9-204ENST00000561869 TRHRP34981 398 aaPredicted RBP4□□□□□ -1.77
CHD9-204ENST00000561869 CTSKP43235 329 aa4□□□□□ -1.77
CHD9-204ENST00000561869 GIPRP48546 466 aa4□□□□□ -1.77
CHD9-204ENST00000561869 PMS1P54277 932 aaKnown RBP4□□□□□ -1.77
CHD9-204ENST00000561869 AUHQ13825 339 aaKnown RBP4□□□□□ -1.77
CHD9-204ENST00000561869 PKN1Q16512 942 aa4□□□□□ -1.77
CHD9-204ENST00000561869 MLANAQ16655 118 aa4□□□□□ -1.77
CHD9-204ENST00000561869 CLEC16AQ2KHT3 1053 aa4□□□□□ -1.77
CHD9-204ENST00000561869 BBS9Q3SYG4 887 aa4□□□□□ -1.77
CHD9-204ENST00000561869 TIGD5Q53EQ6 642 aa4□□□□□ -1.77
CHD9-204ENST00000561869 TMEM67Q5HYA8 995 aa4□□□□□ -1.77
CHD9-204ENST00000561869 UNC5AQ6ZN44 842 aa4□□□□□ -1.77
CHD9-204ENST00000561869 C1QL4Q86Z23 238 aa4□□□□□ -1.77
CHD9-204ENST00000561869 LINC00116Q8NCU8 138 aa4□□□□□ -1.77
CHD9-204ENST00000561869 PDZD8Q8NEN9 1154 aa4□□□□□ -1.77
CHD9-204ENST00000561869 GPRASP2Q96D09 838 aa4□□□□□ -1.77
CHD9-204ENST00000561869 FAM84AQ96KN4 292 aa4□□□□□ -1.77
CHD9-204ENST00000561869 FOXP3Q9BZS1 431 aa4□□□□□ -1.77
CHD9-204ENST00000561869 C19orf44Q9H6X5 657 aa4□□□□□ -1.77
CHD9-204ENST00000561869 EFR3BQ9Y2G0 817 aa4□□□□□ -1.77
CHD9-204ENST00000561869 LTBP3Q9NS15 1303 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 EFEMP2O95967 443 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 GUCY2CP25092 1073 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 CEBPAP49715 358 aaPredicted RBP3.99□□□□□ -1.77
CHD9-204ENST00000561869 CHMP4BP1P59074 171 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 NR0B2Q15466 257 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 ANKRD39Q53RE8 183 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 ZPBP2Q6X784 338 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 CCDC81Q6ZN84 652 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 RNF111Q6ZNA4 994 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 PRR23BQ6ZRT6 265 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 ABHD4Q8TB40 342 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 MYLIPQ8WY64 445 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 ZNF428Q96B54 188 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 SHISA4Q96DD7 197 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 DHRS1Q96LJ7 313 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 SPATA32Q96LK8 384 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 TGIF2Q9GZN2 237 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 ASCC2Q9H1I8 757 aaPredicted RBP3.99□□□□□ -1.77
CHD9-204ENST00000561869 ACBD3Q9H3P7 528 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 CHST7Q9NS84 486 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 GFOD1Q9NXC2 390 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 FAM53CQ9NYF3 392 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 PRR13Q9NZ81 148 aa3.99□□□□□ -1.77
CHD9-204ENST00000561869 CCDC9Q9Y3X0 531 aaKnown RBP3.99□□□□□ -1.77
CHD9-204ENST00000561869 KRT1P04264 644 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 RAC2P15153 192 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 CFPP27918 469 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 AXDND1Q5T1B0 1012 aaPredicted RBP3.98□□□□□ -1.77
CHD9-204ENST00000561869 TDRD10Q5VZ19 366 aaKnown RBP3.98□□□□□ -1.77
CHD9-204ENST00000561869 FBXW10Q5XX13 1052 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 LCNL1Q6ZST4 164 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 C7orf61Q8IZ16 206 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 DHX38Q92620 1227 aaKnown RBP3.98□□□□□ -1.77
CHD9-204ENST00000561869 SHDQ96IW2 340 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 SLC38A3Q99624 504 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
CHD9-204ENST00000561869 MKRN2Q9H000 416 aaKnown RBP3.98□□□□□ -1.77
CHD9-204ENST00000561869 RNF32Q9H0A6 362 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms