RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 C12orf42Q96LP6 360 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 KCNH4Q9UQ05 1017 aa14.75□□□□□ -0.05
CMTM4-203ENST00000561680 TCHHQ07283 1943 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 IRF6O14896 467 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 DHX16O60231 1041 aaKnown RBP14.74□□□□□ -0.05
CMTM4-203ENST00000561680 ADD1P35611 737 aaKnown RBP14.74□□□□□ -0.05
CMTM4-203ENST00000561680 GJA5P36382 358 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 SLC1A4P43007 532 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 NTRK3Q16288 839 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 CCDC96Q2M329 555 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 SH3D19Q5HYK7 790 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 GPATCH4Q5T3I0 446 aaKnown RBP14.74□□□□□ -0.05
CMTM4-203ENST00000561680 USP17L2Q6R6M4 530 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 SAPCD2Q86UD0 394 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 INTS4Q96HW7 963 aaKnown RBP14.74□□□□□ -0.05
CMTM4-203ENST00000561680 WNK4Q96J92 1243 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 IPO9Q96P70 1041 aaKnown RBP14.74□□□□□ -0.05
CMTM4-203ENST00000561680 LLPHQ9BRT6 129 aaKnown RBP14.74□□□□□ -0.05
CMTM4-203ENST00000561680 EMILIN3Q9NT22 766 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 TLL2Q9Y6L7 1015 aa14.74□□□□□ -0.05
CMTM4-203ENST00000561680 FRMPD2Q68DX3 1309 aaPredicted RBP14.73□□□□□ -0.05
CMTM4-203ENST00000561680 CNTNAP5Q8WYK1 1306 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 ZNFX1Q9P2E3 1918 aaKnown RBP14.73□□□□□ -0.05
CMTM4-203ENST00000561680 A0A0G2JLL6 359 aaPredicted RBP14.73□□□□□ -0.05
CMTM4-203ENST00000561680 TMEM88BA6NKF7 163 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 CXCL11O14625 94 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 CPLX1O14810 134 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 WDR46O15213 610 aaKnown RBP14.73□□□□□ -0.05
CMTM4-203ENST00000561680 RAD21O60216 631 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 PLEKHA8P1O95397 391 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 CTDNEP1O95476 244 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 BMP3P12645 472 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 IFNAR1P17181 557 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 GNAQP50148 359 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 HMGCS2P54868 508 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 FUT2Q10981 343 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 DGKZQ13574 1117 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 PRRT2Q7Z6L0 340 aaPredicted RBP14.73□□□□□ -0.05
CMTM4-203ENST00000561680 SPICE1Q8N0Z3 855 aa14.73□□□□□ -0.05
CMTM4-203ENST00000561680 NSUN7Q8NE18 718 aaKnown RBP14.73□□□□□ -0.05
CMTM4-203ENST00000561680 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.73□□□□□ -0.05
CMTM4-203ENST00000561680 KLRF2D3W0D1 207 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 CDKL5O76039 1030 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 GOLGA8HP0CJ92 632 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 ZBTB48P10074 688 aaPredicted RBP14.72□□□□□ -0.05
CMTM4-203ENST00000561680 VCAM1P19320 739 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 FAM83BQ5T0W9 1011 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 CPLX2Q6PUV4 134 aaKnown RBP14.72□□□□□ -0.05
CMTM4-203ENST00000561680 KCTD1Q719H9 257 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 SRBD1Q8N5C6 995 aaKnown RBP14.72□□□□□ -0.05
CMTM4-203ENST00000561680 SMARCC2Q8TAQ2 1214 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 NUP88Q99567 741 aaPredicted RBP14.72□□□□□ -0.05
CMTM4-203ENST00000561680 LZTS2Q9BRK4 669 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 SPZ1Q9BXG8 430 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.72□□□□□ -0.05
CMTM4-203ENST00000561680 THSD7BQ9C0I4 1608 aa14.72□□□□□ -0.05
CMTM4-203ENST00000561680 STK36Q9NRP7 1315 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 PTPDC1A2A3K4 754 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 JAK2O60674 1132 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 PLA2G6O60733 806 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 HSP90AA1P07900 732 aaKnown RBP14.71□□□□□ -0.05
CMTM4-203ENST00000561680 SMARCA1P28370 1054 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 SLC4A3P48751 1232 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 SLC35G1Q2M3R5 365 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 SPRYD7Q5W111 196 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 BTNL9Q6UXG8 535 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 NBPF11Q86T75 865 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 RASAL3Q86YV0 1011 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 PROCA1Q8NCQ7 364 aaPredicted RBP14.71□□□□□ -0.05
CMTM4-203ENST00000561680 HHIPL1Q96JK4 782 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 GPCPD1Q9NPB8 672 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 TMOD4Q9NZQ9 345 aa14.71□□□□□ -0.05
CMTM4-203ENST00000561680 CYTH3O43739 400 aa14.7□□□□□ -0.06
CMTM4-203ENST00000561680 HMGN5P82970 282 aaKnown RBP14.7□□□□□ -0.06
CMTM4-203ENST00000561680 SNAPC2Q13487 334 aa14.7□□□□□ -0.06
CMTM4-203ENST00000561680 MOGSQ13724 837 aa14.7□□□□□ -0.06
CMTM4-203ENST00000561680 TTBK2Q6IQ55 1244 aa14.7□□□□□ -0.06
CMTM4-203ENST00000561680 RGMBQ6NW40 437 aa14.7□□□□□ -0.06
CMTM4-203ENST00000561680 CMTR1Q8N1G2 835 aaKnown RBP14.7□□□□□ -0.06
CMTM4-203ENST00000561680 PHKBQ93100 1093 aa14.7□□□□□ -0.06
CMTM4-203ENST00000561680 RNF26Q9BY78 433 aaPredicted RBP14.7□□□□□ -0.06
CMTM4-203ENST00000561680 CPVLQ9H3G5 476 aa14.7□□□□□ -0.06
CMTM4-203ENST00000561680 RPAP3Q9H6T3 665 aaPredicted RBP14.7□□□□□ -0.06
CMTM4-203ENST00000561680 RIOX1Q9H6W3 641 aa14.7□□□□□ -0.06
CMTM4-203ENST00000561680 ISY1Q9ULR0 285 aaKnown RBP14.7□□□□□ -0.06
CMTM4-203ENST00000561680 MGAMO43451 1857 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 MYH7BA7E2Y1 1941 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 TMEM232C9JQI7 657 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 FMNL1O95466 1100 aaPredicted RBP14.69□□□□□ -0.06
CMTM4-203ENST00000561680 SLC10A3P09131 477 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 APLP1P51693 650 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 ZNF157P51786 506 aaPredicted RBP14.69□□□□□ -0.06
CMTM4-203ENST00000561680 STAT2P52630 851 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 SSRP1Q08945 709 aaKnown RBP14.69□□□□□ -0.06
CMTM4-203ENST00000561680 FAM160B2Q86V87 743 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 SLC26A6Q9BXS9 759 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 UBA5Q9GZZ9 404 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
CMTM4-203ENST00000561680 DAXXQ9UER7 740 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms