RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 INCENPQ9NQS7 918 aa28.28■■■□□ 2.12
CDR2-202ENST00000561630 FBXO28Q9NVF7 368 aa28.28■■■□□ 2.12
CDR2-202ENST00000561630 TACC3Q9Y6A5 838 aa28.28■■■□□ 2.12
CDR2-202ENST00000561630 SLC15A5A6NIM6 579 aa28.27■■■□□ 2.12
CDR2-202ENST00000561630 NDUFB10O96000 172 aa28.27■■■□□ 2.12
CDR2-202ENST00000561630 PTPREP23469 700 aa28.27■■■□□ 2.12
CDR2-202ENST00000561630 WDR78Q5VTH9 848 aa28.27■■■□□ 2.12
CDR2-202ENST00000561630 TRMT44Q8IYL2 757 aaKnown RBP28.27■■■□□ 2.12
CDR2-202ENST00000561630 SHCBP1Q8NEM2 672 aa28.27■■■□□ 2.12
CDR2-202ENST00000561630 SHISA4Q96DD7 197 aa28.27■■■□□ 2.12
CDR2-202ENST00000561630 ORC4O43929 436 aa28.26■■■□□ 2.11
CDR2-202ENST00000561630 MAP2K5Q13163 448 aa28.26■■■□□ 2.11
CDR2-202ENST00000561630 TTC22Q5TAA0 569 aa28.26■■■□□ 2.11
CDR2-202ENST00000561630 NUP88Q99567 741 aaPredicted RBP28.26■■■□□ 2.11
CDR2-202ENST00000561630 APBA2Q99767 749 aa28.26■■■□□ 2.11
CDR2-202ENST00000561630 PAK6Q9NQU5 681 aaPredicted RBP28.26■■■□□ 2.11
CDR2-202ENST00000561630 PPP1R9AQ9ULJ8 1098 aa28.26■■■□□ 2.11
CDR2-202ENST00000561630 IVNS1ABPQ9Y6Y0 642 aa28.26■■■□□ 2.11
CDR2-202ENST00000561630 PDE4DIPQ5VU43 2346 aa28.26■■■□□ 2.11
CDR2-202ENST00000561630 RLFQ13129 1914 aa28.26■■■□□ 2.11
CDR2-202ENST00000561630 PLXNB2O15031 1838 aa28.25■■■□□ 2.11
CDR2-202ENST00000561630 TSPY2A6NKD2 308 aa28.25■■■□□ 2.11
CDR2-202ENST00000561630 GSPT1P15170 499 aaKnown RBP28.25■■■□□ 2.11
CDR2-202ENST00000561630 GRB14Q14449 540 aa28.25■■■□□ 2.11
CDR2-202ENST00000561630 PPP4R3BQ5MIZ7 849 aa28.25■■■□□ 2.11
CDR2-202ENST00000561630 SAMD1Q6SPF0 538 aaPredicted RBP28.25■■■□□ 2.11
CDR2-202ENST00000561630 GMCL1P1Q8NEA9 526 aa28.25■■■□□ 2.11
CDR2-202ENST00000561630 U2AF1L4Q8WU68 220 aaKnown RBP28.25■■■□□ 2.11
CDR2-202ENST00000561630 VWA5AO00534 786 aa28.24■■■□□ 2.11
CDR2-202ENST00000561630 ERCC3P19447 782 aa28.24■■■□□ 2.11
CDR2-202ENST00000561630 TRIM32Q13049 653 aa28.24■■■□□ 2.11
CDR2-202ENST00000561630 TMEM132BQ14DG7 1078 aa28.24■■■□□ 2.11
CDR2-202ENST00000561630 LRRC47Q8N1G4 583 aaKnown RBP28.24■■■□□ 2.11
CDR2-202ENST00000561630 A0A0G2JMZ2 1700 aa28.23■■■□□ 2.11
CDR2-202ENST00000561630 STRNO43815 780 aa28.23■■■□□ 2.11
CDR2-202ENST00000561630 RANBP6O60518 1105 aaKnown RBP28.23■■■□□ 2.11
CDR2-202ENST00000561630 SGPL1O95470 568 aa28.23■■■□□ 2.11
CDR2-202ENST00000561630 ZKSCAN1P17029 563 aaPredicted RBP28.23■■■□□ 2.11
CDR2-202ENST00000561630 PLS1Q14651 629 aa28.23■■■□□ 2.11
CDR2-202ENST00000561630 SLF1Q9BQI6 1058 aa28.23■■■□□ 2.11
CDR2-202ENST00000561630 MROH8Q9H579 483 aa28.23■■■□□ 2.11
CDR2-202ENST00000561630 IL17RBQ9NRM6 502 aa28.23■■■□□ 2.11
CDR2-202ENST00000561630 RPTORQ8N122 1335 aa28.22■■■□□ 2.11
CDR2-202ENST00000561630 HOXC6P09630 235 aa28.22■■■□□ 2.11
CDR2-202ENST00000561630 CCL14Q16627 93 aa28.22■■■□□ 2.11
CDR2-202ENST00000561630 MAP3K21Q5TCX8 1036 aa28.22■■■□□ 2.11
CDR2-202ENST00000561630 DEFB118Q96PH6 123 aa28.22■■■□□ 2.11
CDR2-202ENST00000561630 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.22■■■□□ 2.11
CDR2-202ENST00000561630 CAPN2P17655 700 aa28.21■■■□□ 2.11
CDR2-202ENST00000561630 REPS2Q8NFH8 660 aa28.21■■■□□ 2.11
CDR2-202ENST00000561630 HMX1Q9NP08 348 aaPredicted RBP28.21■■■□□ 2.11
CDR2-202ENST00000561630 STX8Q9UNK0 236 aa28.21■■■□□ 2.11
CDR2-202ENST00000561630 NMT2O60551 498 aa28.2■■■□□ 2.1
CDR2-202ENST00000561630 SLC25A27O95847 323 aa28.2■■■□□ 2.1
CDR2-202ENST00000561630 PRKAR2AP13861 404 aaKnown RBP28.2■■■□□ 2.1
CDR2-202ENST00000561630 HAND2P61296 217 aa28.2■■■□□ 2.1
CDR2-202ENST00000561630 SLFN13Q68D06 897 aa28.2■■■□□ 2.1
CDR2-202ENST00000561630 NCAPG2Q86XI2 1143 aa28.2■■■□□ 2.1
CDR2-202ENST00000561630 PRPF38AQ8NAV1 312 aaKnown RBP28.2■■■□□ 2.1
CDR2-202ENST00000561630 NBPF3Q9H094 633 aa28.2■■■□□ 2.1
CDR2-202ENST00000561630 TOMM22Q9NS69 142 aa28.2■■■□□ 2.1
CDR2-202ENST00000561630 ZNF214Q9UL59 606 aaPredicted RBP28.2■■■□□ 2.1
CDR2-202ENST00000561630 PCP11498 1178 aaKnown RBP28.19■■■□□ 2.1
CDR2-202ENST00000561630 STAT3P40763 770 aa28.19■■■□□ 2.1
CDR2-202ENST00000561630 NOVP48745 357 aa28.19■■■□□ 2.1
CDR2-202ENST00000561630 RIOX2Q8IUF8 465 aa28.19■■■□□ 2.1
CDR2-202ENST00000561630 ABRAQ8N0Z2 381 aa28.19■■■□□ 2.1
CDR2-202ENST00000561630 CRISPLD2Q9H0B8 497 aa28.19■■■□□ 2.1
CDR2-202ENST00000561630 ADORA2AP29274 412 aa28.18■■■□□ 2.1
CDR2-202ENST00000561630 CACNB2Q08289 660 aaPredicted RBP28.18■■■□□ 2.1
CDR2-202ENST00000561630 RRP12Q5JTH9 1297 aaKnown RBP28.18■■■□□ 2.1
CDR2-202ENST00000561630 AKNAD1Q5T1N1 836 aa28.18■■■□□ 2.1
CDR2-202ENST00000561630 UBE2Q1Q7Z7E8 422 aa28.18■■■□□ 2.1
CDR2-202ENST00000561630 STAG1Q8WVM7 1258 aa28.18■■■□□ 2.1
CDR2-202ENST00000561630 GMCL1Q96IK5 515 aa28.18■■■□□ 2.1
CDR2-202ENST00000561630 DSCC1Q9BVC3 393 aa28.18■■■□□ 2.1
CDR2-202ENST00000561630 FEM1BQ9UK73 627 aa28.18■■■□□ 2.1
CDR2-202ENST00000561630 TFRCP02786 760 aaKnown RBP28.17■■■□□ 2.1
CDR2-202ENST00000561630 BMP3P12645 472 aa28.17■■■□□ 2.1
CDR2-202ENST00000561630 MFSD6Q6ZSS7 791 aa28.17■■■□□ 2.1
CDR2-202ENST00000561630 TBC1D10CQ8IV04 446 aa28.17■■■□□ 2.1
CDR2-202ENST00000561630 RNF41Q9H4P4 317 aaPredicted RBP28.17■■■□□ 2.1
CDR2-202ENST00000561630 TCP11L1Q9NUJ3 509 aa28.17■■■□□ 2.1
CDR2-202ENST00000561630 FLRT1Q9NZU1 646 aa28.17■■■□□ 2.1
CDR2-202ENST00000561630 ZNF213O14771 459 aa28.16■■■□□ 2.1
CDR2-202ENST00000561630 PRPF38BQ5VTL8 546 aaKnown RBP28.16■■■□□ 2.1
CDR2-202ENST00000561630 DPP9Q86TI2 863 aa28.16■■■□□ 2.1
CDR2-202ENST00000561630 NPLOC4Q8TAT6 608 aa28.16■■■□□ 2.1
CDR2-202ENST00000561630 PARP14Q460N5 1801 aa28.15■■■□□ 2.1
CDR2-202ENST00000561630 COPB2P35606 906 aa28.15■■■□□ 2.1
CDR2-202ENST00000561630 MFSD14CQ5VZR4 134 aa28.15■■■□□ 2.1
CDR2-202ENST00000561630 KIFC2Q96AC6 838 aa28.15■■■□□ 2.1
CDR2-202ENST00000561630 TEX13BQ9BXU2 312 aa28.15■■■□□ 2.1
CDR2-202ENST00000561630 IL25Q9H293 177 aa28.15■■■□□ 2.1
CDR2-202ENST00000561630 ATP2A1O14983 1001 aa28.14■■■□□ 2.1
CDR2-202ENST00000561630 COBLO75128 1261 aa28.14■■■□□ 2.1
CDR2-202ENST00000561630 ZBED4O75132 1171 aa28.14■■■□□ 2.1
CDR2-202ENST00000561630 IGHA2P01877 340 aa28.14■■■□□ 2.1
CDR2-202ENST00000561630 FCER1AP12319 257 aa28.14■■■□□ 2.1
CDR2-202ENST00000561630 MCCP23508 829 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms