RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TRIM4Q9C037 500 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 ARHGAP42A6NI28 874 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 ITGA6P23229 1130 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 ZAP70P43403 619 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 C2orf54Q08AI8 447 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 CCDC14Q49A88 953 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 METTL22Q9BUU2 404 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 FTOQ9C0B1 505 aaKnown RBP eCLIP11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 EPN1Q9Y6I3 576 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 TNRQ92752 1358 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 PFKFB2O60825 505 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 IFNAR2P48551 515 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 RASSF2P50749 326 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 NCBP1Q09161 790 aaKnown RBP11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 FAM47CQ5HY64 1035 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 CCDC84Q86UT8 332 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 KRT12Q99456 494 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 HAUS4Q9H6D7 363 aa11.27□□□□□ -0.61
GTF3C1-202ENST00000561623 ATP8B1O43520 1251 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 SMIM24O75264 130 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 VPS41P49754 854 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 RBM6P78332 1123 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 RBL2Q08999 1139 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 SCRN1Q12765 414 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 PPP2R5DQ14738 602 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 TCP11Q8WWU5 503 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 PHLPP2Q6ZVD8 1323 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 ZWINTO95229 277 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 ARID5BQ14865 1188 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 LIN9Q5TKA1 542 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 CCDC117Q8IWD4 279 aaPredicted RBP11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 SIRT1Q96EB6 747 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 DDX27Q96GQ7 796 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 FNBP1Q96RU3 617 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 ODF2LQ9ULJ1 636 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 LAMC3Q9Y6N6 1575 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 CCDC169A6NNP5 214 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 NAA35Q5VZE5 725 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 ZNF804AQ7Z570 1209 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 FCHSD1Q86WN1 690 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 NOSTRINQ8IVI9 506 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 MSANTD4Q8NCY6 345 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 KIFC2Q96AC6 838 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 GAS8O95995 478 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 HOXC9P31274 260 aa11.26□□□□□ -0.61
GTF3C1-202ENST00000561623 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 ARHGEF12Q9NZN5 1544 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 A0A087WUV0 522 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 GMNNO75496 209 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 GCNT3O95395 438 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 PNMA6AP0CW24 399 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 NLRP3Q96P20 1036 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 MAP3K19Q56UN5 1328 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 TROVE2P10155 538 aaKnown RBP eCLIP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 DSCC1Q9BVC3 393 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 LSG1Q9H089 658 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 HOMER3Q9NSC5 361 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 ZNF532Q9HCE3 1301 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 SOWAHDA6NJG2 315 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 NONOQ15233 471 aaKnown RBP eCLIP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 LGR6Q9HBX8 967 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 SPATS2LQ9NUQ6 558 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 TMOD4Q9NZQ9 345 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 COG7P83436 770 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 PPP2R5AQ15172 486 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 CALCRLQ16602 461 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 ACRBPQ8NEB7 543 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 N4BP2L2Q92802 583 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 ZNF274Q96GC6 653 aaPredicted RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 SPC25Q9HBM1 224 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 RASIP1Q5U651 963 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 SPATA1Q5VX52 437 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 PARP2Q9UGN5 583 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 DUOX2Q9NRD8 1548 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 B4DLN1 442 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 CRCPO75575 148 aa11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 TCP1P17987 556 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 MRPL12P52815 198 aaKnown RBP11.25□□□□□ -0.61
GTF3C1-202ENST00000561623 LRRD1A4D1F6 860 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 RASSF7Q02833 373 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 EHHADHQ08426 723 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 PHLDB3Q6NSJ2 640 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 DCPSQ96C86 337 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 SPTLC3Q9NUV7 552 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 SYCP2Q9BX26 1530 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 PLCH2O75038 1416 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 TAF5LO75529 589 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 FAM133BQ5BKY9 247 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 HAUS3Q68CZ6 603 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 MRPL44Q9H9J2 332 aaKnown RBP11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 IBTKQ9P2D0 1353 aaPredicted RBP11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 ADCY1Q08828 1119 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 MYCT1Q8N699 235 aa11.24□□□□□ -0.61
GTF3C1-202ENST00000561623 RABGAP1Q9Y3P9 1069 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms