RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 EMILIN3Q9NT22 766 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
LINC00566-201ENST00000561557 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
LINC00566-201ENST00000561557 A0A1W2PRG0 241 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 TSPY2A6NKD2 308 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L15C9J2P7 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L13C9JLJ4 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L11C9JVI0 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L18D6R9N7 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L22D6RA61 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L17D6RBQ6 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L19D6RCP7 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L20D6RJB6 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 FKTNO75072 461 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 EEF2P13639 858 aaKnown RBP11.34□□□□□ -0.59
LINC00566-201ENST00000561557 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
LINC00566-201ENST00000561557 USP17L24Q0WX57 530 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 ARHGEF6Q15052 776 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 CCDC178Q5BJE1 867 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 VCPKMTQ9H867 229 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 CNNM2Q9H8M5 875 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 MTMR4Q9NYA4 1195 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 CEP350Q5VT06 3117 aa11.34□□□□□ -0.59
LINC00566-201ENST00000561557 RANBP6O60518 1105 aaKnown RBP11.33□□□□□ -0.6
LINC00566-201ENST00000561557 TTLL1O95922 423 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 NOVP48745 357 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 HAND2P61296 217 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
LINC00566-201ENST00000561557 SP3Q02447 781 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 PTH1RQ03431 593 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 TREML2Q5T2D2 321 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 C17orf99Q6UX52 265 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 ESR2Q92731 530 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 ERO1AQ96HE7 468 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 TTC14Q96N46 770 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 KRT23Q9C075 422 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 R3HDMLQ9H3Y0 253 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 GOPCQ9HD26 462 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 TOMM22Q9NS69 142 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 LOC285556D6RIA3 1793 aa11.33□□□□□ -0.6
LINC00566-201ENST00000561557 GREB1LQ9C091 1923 aaPredicted RBP11.33□□□□□ -0.6
LINC00566-201ENST00000561557 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
LINC00566-201ENST00000561557 EPB41L2O43491 1005 aaKnown RBP11.32□□□□□ -0.6
LINC00566-201ENST00000561557 EIF5BO60841 1220 aaKnown RBP11.32□□□□□ -0.6
LINC00566-201ENST00000561557 PSEN2P49810 448 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 TRDNQ13061 729 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 KIF22Q14807 665 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 FAM47AQ5JRC9 791 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 SMCR8Q8TEV9 937 aaPredicted RBP11.32□□□□□ -0.6
LINC00566-201ENST00000561557 ZNF296Q8WUU4 475 aaPredicted RBP11.32□□□□□ -0.6
LINC00566-201ENST00000561557 CEP95Q96GE4 821 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 LSG1Q9H089 658 aaKnown RBP11.32□□□□□ -0.6
LINC00566-201ENST00000561557 NBPF3Q9H094 633 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 ASCC2Q9H1I8 757 aaPredicted RBP11.32□□□□□ -0.6
LINC00566-201ENST00000561557 HOXC10Q9NYD6 342 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 CLIP2Q9UDT6 1046 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 TACC3Q9Y6A5 838 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 ADGRA2Q96PE1 1338 aa11.32□□□□□ -0.6
LINC00566-201ENST00000561557 GNRH1P01148 92 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 CYP21A2P08686 494 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 CYP2C8P10632 490 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 BCRP11274 1271 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 VCAM1P19320 739 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 ATP2B2Q01814 1243 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 COG2Q14746 738 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 ZYXQ15942 572 aaKnown RBP11.31□□□□□ -0.6
LINC00566-201ENST00000561557 PKN2Q16513 984 aaKnown RBP11.31□□□□□ -0.6
LINC00566-201ENST00000561557 RRP12Q5JTH9 1297 aaKnown RBP11.31□□□□□ -0.6
LINC00566-201ENST00000561557 LBX2Q6XYB7 198 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 TBC1D10CQ8IV04 446 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 GMCL1P1Q8NEA9 526 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 P2RX7Q99572 595 aaKnown RBP11.31□□□□□ -0.6
LINC00566-201ENST00000561557 RPAP3Q9H6T3 665 aaPredicted RBP11.31□□□□□ -0.6
LINC00566-201ENST00000561557 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 INCENPQ9NQS7 918 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 RBM8AQ9Y5S9 174 aaKnown RBP11.31□□□□□ -0.6
LINC00566-201ENST00000561557 MYPNQ86TC9 1320 aa11.31□□□□□ -0.6
LINC00566-201ENST00000561557 CASP8AP2Q9UKL3 1982 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 F5H6K3 240 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 REC8O95072 547 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 SLC34A2O95436 690 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 KLRC3Q07444 240 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 NECTIN1Q15223 517 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 FAM110CQ1W6H9 321 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 RNF20Q5VTR2 975 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 CTU1Q7Z7A3 348 aaKnown RBP11.3□□□□□ -0.6
LINC00566-201ENST00000561557 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 IL17RBQ9NRM6 502 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 MORF4L1Q9UBU8 362 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 CPA4Q9UI42 421 aa11.3□□□□□ -0.6
LINC00566-201ENST00000561557 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
LINC00566-201ENST00000561557 TOP1P11387 765 aaKnown RBP11.29□□□□□ -0.6
LINC00566-201ENST00000561557 HOXD10P28358 340 aa11.29□□□□□ -0.6
LINC00566-201ENST00000561557 PRMT2P55345 433 aa11.29□□□□□ -0.6
LINC00566-201ENST00000561557 HERVK_113P62684 666 aa11.29□□□□□ -0.6
LINC00566-201ENST00000561557 LACTBP83111 547 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms