RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 PAGR1Q9BTK6 254 aa8.21□□□□□ -1.1
ZEB1-221ENST00000561061 REPIN1Q9BWE0 567 aaKnown RBP8.21□□□□□ -1.1
ZEB1-221ENST00000561061 SMC4Q9NTJ3 1288 aa8.21□□□□□ -1.1
ZEB1-221ENST00000561061 TMOD4Q9NZQ9 345 aa8.21□□□□□ -1.1
ZEB1-221ENST00000561061 RBPJLQ9UBG7 517 aa8.21□□□□□ -1.1
ZEB1-221ENST00000561061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.21□□□□□ -1.1
ZEB1-221ENST00000561061 TRANK1O15050 2925 aa8.21□□□□□ -1.1
ZEB1-221ENST00000561061 C19orf81C9J6K1 198 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L10C9JJH3 530 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 E9PSI1 815 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 ANP32CO43423 234 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 GDF11O95390 407 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 CD46P15529 392 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 MCAMP43121 646 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 FUT2Q10981 343 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 Q3C1V9 767 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 PPP1R18Q6NYC8 613 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 METTL16Q86W50 562 aaKnown RBP8.2□□□□□ -1.1
ZEB1-221ENST00000561061 GTF3C2Q8WUA4 911 aaPredicted RBP8.2□□□□□ -1.1
ZEB1-221ENST00000561061 MEIS3Q99687 375 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 RAI14Q9P0K7 980 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 PI4KBQ9UBF8 816 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 ZBTB21Q9ULJ3 1066 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 AKAP2Q9Y2D5 859 aa8.2□□□□□ -1.1
ZEB1-221ENST00000561061 GREB1LQ9C091 1923 aaPredicted RBP8.2□□□□□ -1.1
ZEB1-221ENST00000561061 CNMDO75829 334 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 SLFN5Q08AF3 891 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 ZNF697Q5TEC3 545 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 MAPKAPK5Q8IW41 473 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 CCAR1Q8IX12 1150 aaKnown RBP8.19□□□□□ -1.1
ZEB1-221ENST00000561061 NEUROD6Q96NK8 337 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 LBHD1Q9BQE6 289 aaPredicted RBP8.19□□□□□ -1.1
ZEB1-221ENST00000561061 TMUB1Q9BVT8 246 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 SENP6Q9GZR1 1112 aaPredicted RBP8.19□□□□□ -1.1
ZEB1-221ENST00000561061 DHX36Q9H2U1 1008 aaKnown RBP8.19□□□□□ -1.1
ZEB1-221ENST00000561061 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 GINM1Q9NU53 330 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 FLRT1Q9NZU1 646 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 HDAC5Q9UQL6 1122 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 FLT1P17948 1338 aa8.19□□□□□ -1.1
ZEB1-221ENST00000561061 SRGAP3O43295 1099 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 RTP1P59025 263 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 MTX1Q13505 466 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 GORABQ5T7V8 394 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 MFSD14CQ5VZR4 134 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 ADGRA1Q86SQ6 560 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 TRPV1Q8NER1 839 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 TGFBRAP1Q8WUH2 860 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 C12orf42Q96LP6 360 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 CDX2Q99626 313 aaPredicted RBP8.18□□□□□ -1.1
ZEB1-221ENST00000561061 NOL10Q9BSC4 688 aaKnown RBP8.18□□□□□ -1.1
ZEB1-221ENST00000561061 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 CWC22Q9HCG8 908 aaKnown RBP8.18□□□□□ -1.1
ZEB1-221ENST00000561061 AATFQ9NY61 560 aaKnown RBP eCLIP8.18□□□□□ -1.1
ZEB1-221ENST00000561061 LRP2BPQ9P2M1 347 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 DDX20Q9UHI6 824 aaKnown RBP8.18□□□□□ -1.1
ZEB1-221ENST00000561061 PALD1Q9ULE6 856 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 RABGAP1Q9Y3P9 1069 aa8.18□□□□□ -1.1
ZEB1-221ENST00000561061 TRIP12Q14669 1992 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 SCN5AQ14524 2016 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 PRRC2BQ5JSZ5 2229 aaKnown RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 SLC15A5A6NIM6 579 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 DNM1LO00429 736 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 MSCO60682 206 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 GLRX3O76003 335 aaKnown RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 RGS20O76081 388 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 IGHA2P01877 340 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 HOXC6P09630 235 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 CLCN1P35523 988 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 GRB14Q14449 540 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 ZYXQ15942 572 aaKnown RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 NAA16Q6N069 864 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L2Q6R6M4 530 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 FOXP4Q8IVH2 680 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 CRACR2BQ8N4Y2 399 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 MAFAQ8NHW3 353 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 NPLOC4Q8TAT6 608 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 LPAR1Q92633 364 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 API5Q9BZZ5 524 aaKnown RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 FAM217BQ9NTX9 383 aaPredicted RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 SAP30BPQ9UHR5 308 aaKnown RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 NOB1Q9ULX3 412 aaKnown RBP8.17□□□□□ -1.1
ZEB1-221ENST00000561061 NDUFB9Q9Y6M9 179 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 LRRC37A2A6NM11 1700 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 LCTP09848 1927 aa8.17□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L15C9J2P7 530 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L13C9JLJ4 530 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L11C9JVI0 530 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L18D6R9N7 530 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L22D6RA61 530 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L17D6RBQ6 530 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L19D6RCP7 530 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 USP17L20D6RJB6 530 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 NR1I2O75469 434 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 BAG3O95817 575 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 GH2P01242 217 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 HLA-DOAP06340 250 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 GNAI3P08754 354 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 UQCRFS1P1P0C7P4 283 aa8.16□□□□□ -1.1
ZEB1-221ENST00000561061 CYBAP13498 195 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms