RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 USP17L8P0C7I0 530 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 PFKFB3Q16875 520 aaPredicted RBP11.1□□□□□ -0.63
SNX22-206ENST00000560997 PDXDC2PQ6P474 469 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 RASGRP4Q8TDF6 673 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 PANX2Q96RD6 677 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 LZTFL1Q9NQ48 299 aa11.1□□□□□ -0.63
SNX22-206ENST00000560997 GOLGA6L9A6NEM1 432 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 CASP14P31944 242 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 PPFIBP1Q86W92 1011 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 MCM9Q9NXL9 1143 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 MRFAP1Q9Y605 127 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 EFCAB8A8MWE9 144 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 SEMA3EO15041 775 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 SEC31AO94979 1220 aaKnown RBP11.09□□□□□ -0.63
SNX22-206ENST00000560997 PNMA6AP0CW24 399 aaPredicted RBP11.09□□□□□ -0.63
SNX22-206ENST00000560997 FXR1P51114 621 aaKnown RBP eCLIP11.09□□□□□ -0.63
SNX22-206ENST00000560997 STAG2Q8N3U4 1231 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 IQUBQ8NA54 791 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 MYH8P13535 1937 aa11.09□□□□□ -0.63
SNX22-206ENST00000560997 MFAP3LO75121 409 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 GYPCP04921 128 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 PPP2R3AQ06190 1150 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 CT47A1Q5JQC4 288 aaPredicted RBP11.08□□□□□ -0.64
SNX22-206ENST00000560997 SLC10A5Q5PT55 438 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 RRAGBQ5VZM2 374 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 ZNF771Q7L3S4 317 aaPredicted RBP11.08□□□□□ -0.64
SNX22-206ENST00000560997 DYNLL2Q96FJ2 89 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 MAPK8IP1Q9UQF2 711 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 ADGRG1Q9Y653 693 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 CCDC175P0C221 793 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 BMS1Q14692 1282 aaKnown RBP11.08□□□□□ -0.64
SNX22-206ENST00000560997 KRT31Q15323 416 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 TYW1BQ6NUM6 668 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 CCDC12Q8WUD4 166 aaPredicted RBP11.08□□□□□ -0.64
SNX22-206ENST00000560997 IL17RBQ9NRM6 502 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 ARPP21Q9UBL0 812 aaPredicted RBP11.08□□□□□ -0.64
SNX22-206ENST00000560997 GDAQ9Y2T3 454 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 ZRANB2O95218 330 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNX22-206ENST00000560997 TFAP4Q01664 338 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 TERF2Q15554 542 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 TEX35Q5T0J7 233 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
SNX22-206ENST00000560997 RNF225M0QZC1 329 aaPredicted RBP11.07□□□□□ -0.64
SNX22-206ENST00000560997 SBK1Q52WX2 424 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 NBPF5PQ86XG9 351 aaPredicted RBP11.07□□□□□ -0.64
SNX22-206ENST00000560997 CREBRFQ8IUR6 639 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 C4orf32Q8N8J7 132 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 VPS16Q9H269 839 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 CCDC88AQ3V6T2 1871 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 PP2D1A8MPX8 630 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
SNX22-206ENST00000560997 PLA2G4AP47712 749 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 TRAPPC10P48553 1259 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 SLC35G1Q2M3R5 365 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 FILIP1LQ4L180 1135 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 TMCO3Q6UWJ1 677 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 DZIP1Q86YF9 867 aaKnown RBP11.07□□□□□ -0.64
SNX22-206ENST00000560997 BLIDQ8IZY5 108 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 CTAGE1Q96RT6 745 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 KAT14Q9H8E8 782 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 TAB2Q9NYJ8 693 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 USP17L3A6NCW0 530 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 USP17L4A6NCW7 530 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
SNX22-206ENST00000560997 USP17L1Q7RTZ2 530 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 AMIGO3Q86WK7 504 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 PNMA1Q8ND90 353 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 NELFBQ8WX92 580 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 ZSWIM4Q9H7M6 989 aa11.07□□□□□ -0.64
SNX22-206ENST00000560997 PDS5AQ29RF7 1337 aaKnown RBP11.06□□□□□ -0.64
SNX22-206ENST00000560997 KIF20AO95235 890 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 ABL1P00519 1130 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 PAK1Q13153 545 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 GRIK5Q16478 980 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 RSRC2Q7L4I2 434 aaKnown RBP11.06□□□□□ -0.64
SNX22-206ENST00000560997 ACRBPQ8NEB7 543 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 SETDB2Q96T68 719 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 ARGLU1Q9NWB6 273 aaPredicted RBP11.06□□□□□ -0.64
SNX22-206ENST00000560997 MAST2Q6P0Q8 1798 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 N4BP3O15049 544 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 RPN1P04843 607 aaKnown RBP11.06□□□□□ -0.64
SNX22-206ENST00000560997 KIF5BP33176 963 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 ERVK-24P63145 666 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
SNX22-206ENST00000560997 BARGINQ6ZT62 677 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 RASGRP2Q7LDG7 609 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 SLC44A5Q8NCS7 719 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 SH3RF3Q8TEJ3 882 aaPredicted RBP11.06□□□□□ -0.64
SNX22-206ENST00000560997 LIMA1Q9UHB6 759 aaKnown RBP11.06□□□□□ -0.64
SNX22-206ENST00000560997 RWDD2AQ9UIY3 292 aa11.06□□□□□ -0.64
SNX22-206ENST00000560997 PRCPP42785 496 aa11.05□□□□□ -0.64
SNX22-206ENST00000560997 COPB1P53618 953 aaKnown RBP11.05□□□□□ -0.64
SNX22-206ENST00000560997 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
SNX22-206ENST00000560997 C12orf60Q5U649 245 aa11.05□□□□□ -0.64
SNX22-206ENST00000560997 PLIN2Q99541 437 aa11.05□□□□□ -0.64
SNX22-206ENST00000560997 NAA15Q9BXJ9 866 aaKnown RBP11.05□□□□□ -0.64
SNX22-206ENST00000560997 ANKRD2Q9GZV1 360 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms