RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 PPP2R2CQ9Y2T4 447 aa16.59■□□□□ 0.25
CRTC3-210ENST00000560927 CCP110O43303 1012 aa16.59■□□□□ 0.25
CRTC3-210ENST00000560927 TOGARAM2Q6ZUX3 1019 aa16.59■□□□□ 0.25
CRTC3-210ENST00000560927 BLIDQ8IZY5 108 aa16.59■□□□□ 0.25
CRTC3-210ENST00000560927 KMT5BQ4FZB7 885 aa16.58■□□□□ 0.25
CRTC3-210ENST00000560927 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.25
CRTC3-210ENST00000560927 CDKAL1Q5VV42 579 aa16.58■□□□□ 0.25
CRTC3-210ENST00000560927 FCHSD1Q86WN1 690 aa16.58■□□□□ 0.25
CRTC3-210ENST00000560927 C4orf32Q8N8J7 132 aa16.58■□□□□ 0.25
CRTC3-210ENST00000560927 SAP30BPQ9UHR5 308 aaKnown RBP16.58■□□□□ 0.25
CRTC3-210ENST00000560927 LEMD3Q9Y2U8 911 aa16.58■□□□□ 0.25
CRTC3-210ENST00000560927 CYTH3O43739 400 aa16.58■□□□□ 0.24
CRTC3-210ENST00000560927 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
CRTC3-210ENST00000560927 FAM196AQ6ZSG2 479 aa16.58■□□□□ 0.24
CRTC3-210ENST00000560927 RASGRP2Q7LDG7 609 aa16.58■□□□□ 0.24
CRTC3-210ENST00000560927 MAPKAPK5Q8IW41 473 aa16.58■□□□□ 0.24
CRTC3-210ENST00000560927 FAM177A1Q8N128 213 aaPredicted RBP16.58■□□□□ 0.24
CRTC3-210ENST00000560927 IQUBQ8NA54 791 aa16.58■□□□□ 0.24
CRTC3-210ENST00000560927 CNBD1Q8NA66 436 aa16.58■□□□□ 0.24
CRTC3-210ENST00000560927 PHLPP2Q6ZVD8 1323 aa16.58■□□□□ 0.24
CRTC3-210ENST00000560927 STX10O60499 249 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 TSPY3P0CV98 308 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 TSPY8P0CW00 308 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 GRM4Q14833 912 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
CRTC3-210ENST00000560927 ANKS1AQ92625 1134 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 ZMYND15Q9H091 742 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 PCDHA4Q9UN74 947 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 CTNND2Q9UQB3 1225 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.57■□□□□ 0.24
CRTC3-210ENST00000560927 ROBO3Q96MS0 1386 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 NHSQ6T4R5 1651 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 ZBTB22O15209 634 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 TUBB4AP04350 444 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 CALML3P27482 149 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 ERCC6LQ2NKX8 1250 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 CT47A1Q5JQC4 288 aaPredicted RBP16.57■□□□□ 0.24
CRTC3-210ENST00000560927 WWC2Q6AWC2 1192 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 FBXO38Q6PIJ6 1188 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 ADD3Q9UEY8 706 aaKnown RBP16.57■□□□□ 0.24
CRTC3-210ENST00000560927 USP21Q9UK80 565 aa16.57■□□□□ 0.24
CRTC3-210ENST00000560927 M0R2N6 131 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 ZSCAN12O43309 604 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 GPSM2P81274 684 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 MTF1Q14872 753 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 DESI2Q9BSY9 194 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 STX8Q9UNK0 236 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 BAG3O95817 575 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 GOLGA8HP0CJ92 632 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 PPP4CP60510 307 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 ZNF804AQ7Z570 1209 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 TMEM47Q9BQJ4 181 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
CRTC3-210ENST00000560927 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 SH3GLB2Q9NR46 395 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 TAF1LQ8IZX4 1826 aa16.56■□□□□ 0.24
CRTC3-210ENST00000560927 RASA1P20936 1047 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 PBX1P40424 430 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 KARSQ15046 597 aaKnown RBP16.55■□□□□ 0.24
CRTC3-210ENST00000560927 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 ZNF444Q8N0Y2 327 aaPredicted RBP16.55■□□□□ 0.24
CRTC3-210ENST00000560927 ZNF397Q8NF99 534 aaPredicted RBP16.55■□□□□ 0.24
CRTC3-210ENST00000560927 FEZ1Q99689 392 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 PCDHA6Q9UN73 950 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 PCDHA8Q9Y5H6 950 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 GSTO1P78417 241 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 RBL2Q08999 1139 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 RRAGBQ5VZM2 374 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 ARL6IP4Q66PJ3 421 aaKnown RBP16.55■□□□□ 0.24
CRTC3-210ENST00000560927 HEATR3Q7Z4Q2 680 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 SMAP1Q8IYB5 467 aaPredicted RBP16.55■□□□□ 0.24
CRTC3-210ENST00000560927 IGSF22Q8N9C0 903 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 TMEM60Q9H2L4 133 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 LRRC4BQ9NT99 713 aa16.55■□□□□ 0.24
CRTC3-210ENST00000560927 PP2D1A8MPX8 630 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 AKR1B15C9JRZ8 316 aaPredicted RBP16.54■□□□□ 0.24
CRTC3-210ENST00000560927 GTPBP6O43824 516 aaPredicted RBP16.54■□□□□ 0.24
CRTC3-210ENST00000560927 BTDP43251 543 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 WDR24Q96S15 920 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 SOWAHDA6NJG2 315 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 STXBP3O00186 592 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 URI1O94763 535 aaPredicted RBP16.54■□□□□ 0.24
CRTC3-210ENST00000560927 LONP1P36776 959 aaKnown RBP16.54■□□□□ 0.24
CRTC3-210ENST00000560927 CCT6AP40227 531 aaKnown RBP16.54■□□□□ 0.24
CRTC3-210ENST00000560927 INF2Q27J81 1249 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 AMOTL1Q8IY63 956 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 TCP11L1Q9NUJ3 509 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 DDX41Q9UJV9 622 aaKnown RBP16.54■□□□□ 0.24
CRTC3-210ENST00000560927 MAPK8IP1Q9UQF2 711 aa16.54■□□□□ 0.24
CRTC3-210ENST00000560927 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 CCDC194A0A1B0GVG4 234 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 PALM3A6NDB9 673 aaPredicted RBP16.53■□□□□ 0.24
CRTC3-210ENST00000560927 UFL1O94874 794 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 CD209Q9NNX6 404 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 GDAQ9Y2T3 454 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 NAV1Q8NEY1 1877 aa16.53■□□□□ 0.24
CRTC3-210ENST00000560927 RPN1P04843 607 aaKnown RBP16.53■□□□□ 0.24
CRTC3-210ENST00000560927 GNAQP50148 359 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms