RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 TRPM2O94759 1503 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 MYOM2P54296 1465 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 MAGI1Q96QZ7 1491 aaPredicted RBP6.31□□□□□ -1.4
TPM1-222ENST00000560131 DYRK3O43781 588 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 DDAH1O94760 285 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 ESRRAP11474 423 aaPredicted RBP6.31□□□□□ -1.4
TPM1-222ENST00000560131 FAM193AP78312 1265 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 PTPN11Q06124 597 aaPredicted RBP6.31□□□□□ -1.4
TPM1-222ENST00000560131 BMP2KLQ5H9B9 411 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 SYT9Q86SS6 491 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 PANK1Q8TE04 598 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 FEZ1Q99689 392 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 UBE2OQ9C0C9 1292 aaKnown RBP6.31□□□□□ -1.4
TPM1-222ENST00000560131 LEMD3Q9Y2U8 911 aa6.31□□□□□ -1.4
TPM1-222ENST00000560131 POLR3KQ9Y2Y1 108 aaPredicted RBP6.31□□□□□ -1.4
TPM1-222ENST00000560131 A0A1W2PQH9 124 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 SIN3BO75182 1162 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 BAG4O95429 457 aaKnown RBP6.3□□□□□ -1.4
TPM1-222ENST00000560131 TSPY4P0CV99 314 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 TSPY10P0CW01 314 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 MASP1P48740 699 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 DGKGP49619 791 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 AMPD3Q01432 767 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 CTBSQ01459 385 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 TBC1D8BQ0IIM8 1120 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 LRP8Q14114 963 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 PDZD3Q86UT5 571 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 SYNPOQ8N3V7 929 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 ST13P5Q8NFI4 369 aaPredicted RBP6.3□□□□□ -1.4
TPM1-222ENST00000560131 ZNF669Q96BR6 464 aaPredicted RBP6.3□□□□□ -1.4
TPM1-222ENST00000560131 RUNDC1Q96C34 613 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 TM9SF2Q99805 663 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 CHMP4BQ9H444 224 aaKnown RBP6.3□□□□□ -1.4
TPM1-222ENST00000560131 GGA1Q9UJY5 639 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 DDX19BQ9UMR2 479 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 SAMD9LQ8IVG5 1584 aa6.3□□□□□ -1.4
TPM1-222ENST00000560131 INO80Q9ULG1 1556 aaPredicted RBP6.3□□□□□ -1.4
TPM1-222ENST00000560131 PPRC1Q5VV67 1664 aaKnown RBP6.3□□□□□ -1.4
TPM1-222ENST00000560131 MED14O60244 1454 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 PLB1Q6P1J6 1458 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 ABCA6Q8N139 1617 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 FAM177BA6PVY3 158 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 GRIN3BO60391 1043 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 BMP4P12644 408 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 CPB1P15086 417 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 AP3B2Q13367 1082 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 IKBKEQ14164 716 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 SYCP1Q15431 976 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 TCEA2Q15560 299 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 UVSSAQ2YD98 709 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 PRSS36Q5K4E3 855 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 ZKSCAN2Q63HK3 967 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 ADAMTSL4Q6UY14 1074 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 RUFY4Q6ZNE9 571 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 TTC6Q86TZ1 520 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 FAM35AQ86V20 835 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 RPUSD2Q8IZ73 545 aaKnown RBP6.29□□□□□ -1.4
TPM1-222ENST00000560131 KIF2CQ99661 725 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 TPSG1Q9NRR2 321 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 ZMYM5Q9UJ78 669 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 CDC42BPBQ9Y5S2 1711 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 ABCC11Q96J66 1382 aa6.29□□□□□ -1.4
TPM1-222ENST00000560131 IL16Q14005 1332 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 PRR36Q9H6K5 1346 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 PTPRTO14522 1441 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 NOS1P29475 1434 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 MEIS3P2A8K0S8 358 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 MBD3O95983 291 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 EPXP11678 715 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 YBX3P16989 372 aaKnown RBP eCLIP6.28□□□□□ -1.4
TPM1-222ENST00000560131 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 TXKP42681 527 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 CABP4P57796 275 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 NUCB1Q02818 461 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 SLC20A2Q08357 652 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 RABEP1Q15276 862 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 ZSCAN23Q3MJ62 389 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 PERM1Q5SV97 790 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 ZNF468Q5VIY5 522 aaPredicted RBP6.28□□□□□ -1.4
TPM1-222ENST00000560131 MAP1SQ66K74 1059 aaPredicted RBP6.28□□□□□ -1.4
TPM1-222ENST00000560131 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 LRSAM1Q6UWE0 723 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 C6orf15Q6UXA7 325 aaPredicted RBP6.28□□□□□ -1.4
TPM1-222ENST00000560131 MPRIPQ6WCQ1 1025 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 SPATC1Q76KD6 591 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 CREBRFQ8IUR6 639 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 DZIP1LQ8IYY4 767 aaKnown RBP6.28□□□□□ -1.4
TPM1-222ENST00000560131 FAM184AQ8NB25 1140 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 TNFRSF25Q93038 417 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 LACRTQ9GZZ8 138 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 LMBRD1Q9NUN5 540 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 DDX56Q9NY93 547 aaKnown RBP6.28□□□□□ -1.4
TPM1-222ENST00000560131 KLHL42Q9P2K6 505 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 PFDN2Q9UHV9 154 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 SLC12A7Q9Y666 1083 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 DDX49Q9Y6V7 483 aaKnown RBP6.28□□□□□ -1.4
TPM1-222ENST00000560131 ERVK-7P63135 1459 aa6.28□□□□□ -1.4
TPM1-222ENST00000560131 ZNF518AQ6AHZ1 1483 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms