RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 MKRN1Q9UHC7 482 aaKnown RBP5.79□□□□□ -1.48
LRRC49-221ENST00000560107 MAPK8IP1Q9UQF2 711 aa5.79□□□□□ -1.48
LRRC49-221ENST00000560107 EPN1Q9Y6I3 576 aaPredicted RBP5.79□□□□□ -1.48
LRRC49-221ENST00000560107 NID2Q14112 1375 aa5.79□□□□□ -1.48
LRRC49-221ENST00000560107 ALS2Q96Q42 1657 aa5.79□□□□□ -1.48
LRRC49-221ENST00000560107 MYH6P13533 1939 aa5.79□□□□□ -1.48
LRRC49-221ENST00000560107 XDHP47989 1333 aa5.79□□□□□ -1.48
LRRC49-221ENST00000560107 UBR2Q8IWV8 1755 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 ERICH2A1L162 156 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 ANKRD18BA2A2Z9 1011 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 LRRC10BA6NIK2 292 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 SNAP23O00161 211 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 ZMYND10O75800 440 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 NDUFA10O95299 355 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 ATP1A1P05023 1023 aaKnown RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 TUBBP07437 444 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 TDO2P48775 406 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 TRIM28Q13263 835 aaKnown RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 SART3Q15020 963 aaKnown RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 EP400NLQ6ZTU2 488 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 TRAPPC11Q7Z392 1133 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 LCORLQ8N3X6 602 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 OTUD6BQ8N6M0 293 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 GOLGA6L1Q8N7Z2 621 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 CAPZA3Q96KX2 299 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 ACBD3Q9H3P7 528 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 C1orf167Q5SNV9 1468 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 CCDC196A0A1B0GTZ2 297 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 KCNJ18B7U540 433 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 SMIM22K7EJ46 135 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 PRPF6O94906 941 aaKnown RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 UQCRFS1P1P0C7P4 283 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 KRT2P35908 639 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 CORO7P57737 925 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 UBXN1Q04323 297 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 KCNJ12Q14500 433 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 PKN1Q16512 942 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 HLFQ16534 295 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 TTC31Q49AM3 519 aaPredicted RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 TCP11X2Q5H9J9 407 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 GSPT2Q8IYD1 628 aaKnown RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 MIGA1Q8NAN2 632 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 SPATA5Q8NB90 893 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 ZCRB1Q8TBF4 217 aaKnown RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 AFAP1L1Q8TED9 768 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 STAG1Q8WVM7 1258 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 MTRQ99707 1265 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 VIPAS39Q9H9C1 493 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 GEMIN8Q9NWZ8 242 aaKnown RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 HPCAL4Q9UM19 191 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 SLC4A4Q9Y6R1 1079 aa5.78□□□□□ -1.48
LRRC49-221ENST00000560107 ZC3H4Q9UPT8 1303 aaKnown RBP5.78□□□□□ -1.48
LRRC49-221ENST00000560107 TTC26A0AVF1 554 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 ERVV-2B6SEH9 535 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PSMD14O00487 310 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PPFIA4O75335 1185 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 POLD1P28340 1107 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 AARSP49588 968 aaKnown RBP eCLIP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 CTSWP56202 376 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 HERVK_113P62684 666 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 MAP3K12Q12852 859 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PAK1Q13153 545 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 NBPF9Q3BBW0 867 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 KIF6Q6ZMV9 814 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PROSER2Q86WR7 435 aaPredicted RBP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 BANK1Q8NDB2 785 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 NELFBQ8WX92 580 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 FERMT2Q96AC1 680 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 HINFPQ9BQA5 517 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PHF20Q9BVI0 1012 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 RWDD2AQ9UIY3 292 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 GDAQ9Y2T3 454 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 ZBTB12Q9Y330 459 aaPredicted RBP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 SAR1BQ9Y6B6 198 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 V9GY48 417 aaPredicted RBP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 ADAMTSL3P82987 1691 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 BCL9LQ86UU0 1499 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PES1O00541 588 aaKnown RBP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PLEKHA8P1O95397 391 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 MYBL2P10244 700 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 GGCXP38435 758 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PTGDRQ13258 359 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 STIM1Q13586 685 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 RASGRF1Q13972 1273 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 E2F4Q16254 413 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 CCDC122Q5T0U0 273 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PDXDC2PQ6P474 469 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 DNAJC14Q6Y2X3 702 aaPredicted RBP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 NLRP10Q86W26 655 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 IRF2BP1Q8IU81 584 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 ZNF513Q8N8E2 541 aaPredicted RBP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 CTCFLQ8NI51 663 aaPredicted RBP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 COG1Q8WTW3 980 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 UBAC1Q9BSL1 405 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 RNF26Q9BY78 433 aaPredicted RBP5.77□□□□□ -1.49
LRRC49-221ENST00000560107 TIAM2Q8IVF5 1701 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 SPATA31A3Q5VYP0 1347 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PCDH11XQ9BZA7 1347 aa5.77□□□□□ -1.49
LRRC49-221ENST00000560107 PCDH11YQ9BZA8 1340 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms