RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 PALM3A6NDB9 673 aaPredicted RBP12.13□□□□□ -0.47
TPM1-221ENST00000559831 CDKL5O76039 1030 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 TOMM70O94826 608 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 CTDNEP1O95476 244 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 GJB2P29033 226 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 GNAQP50148 359 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 SSRP1Q08945 709 aaKnown RBP12.13□□□□□ -0.47
TPM1-221ENST00000559831 ZNF543Q08ER8 600 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 DGKZQ13574 1117 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 ASPRV1Q53RT3 343 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 LDLRAD1Q5T700 205 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 CST9Q5W186 159 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 ERO1BQ86YB8 467 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 PIBF1Q8WXW3 757 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 PHKBQ93100 1093 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 LLPHQ9BRT6 129 aaKnown RBP12.13□□□□□ -0.47
TPM1-221ENST00000559831 SLC26A6Q9BXS9 759 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 CPVLQ9H3G5 476 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
TPM1-221ENST00000559831 PASKQ96RG2 1323 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 SPDYE5A6NIY4 337 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 SNHG28P0DPA3 235 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 BMP3P12645 472 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 FOSBP53539 338 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 USP14P54578 494 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 HMGCS2P54868 508 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 BACE1P56817 501 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 IKQ13123 557 aaPredicted RBP12.12□□□□□ -0.47
TPM1-221ENST00000559831 NTRK3Q16288 839 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 FAM83BQ5T0W9 1011 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 TTBK2Q6IQ55 1244 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 SRBD1Q8N5C6 995 aaKnown RBP12.12□□□□□ -0.47
TPM1-221ENST00000559831 FAM184AQ8NB25 1140 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 OPTNQ96CV9 577 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 GMCL1Q96IK5 515 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 KIAA1683Q9H0B3 1180 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
TPM1-221ENST00000559831 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 LOC285556D6RIA3 1793 aa12.12□□□□□ -0.47
TPM1-221ENST00000559831 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 PARP14Q460N5 1801 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 IFNAR1P17181 557 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 SLC16A2P36021 539 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 HUNKP57058 714 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 HMGN5P82970 282 aaKnown RBP12.11□□□□□ -0.47
TPM1-221ENST00000559831 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
TPM1-221ENST00000559831 PPATQ06203 517 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 PPIL2Q13356 520 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
TPM1-221ENST00000559831 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
TPM1-221ENST00000559831 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 TRIM22Q8IYM9 498 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 SMARCC2Q8TAQ2 1214 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 LZTS2Q9BRK4 669 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 UBA5Q9GZZ9 404 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 VAT1LQ9HCJ6 419 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 TMOD4Q9NZQ9 345 aa12.11□□□□□ -0.47
TPM1-221ENST00000559831 hCG_1642624A0A1W2PR95 340 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 UNCXA6NJT0 531 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 C19orf81C9J6K1 198 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 TMEM232C9JQI7 657 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 IRF6O14896 467 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 FMNL1O95466 1100 aaPredicted RBP12.1□□□□□ -0.47
TPM1-221ENST00000559831 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
TPM1-221ENST00000559831 GADL1Q6ZQY3 521 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 LPAR1Q92633 364 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 WNK4Q96J92 1243 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 TANGO6Q9C0B7 1094 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 CWC22Q9HCG8 908 aaKnown RBP12.1□□□□□ -0.47
TPM1-221ENST00000559831 STK36Q9NRP7 1315 aa12.1□□□□□ -0.47
TPM1-221ENST00000559831 COL11A1P12107 1806 aaPredicted RBP12.09□□□□□ -0.47
TPM1-221ENST00000559831 WDR46O15213 610 aaKnown RBP12.09□□□□□ -0.47
TPM1-221ENST00000559831 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
TPM1-221ENST00000559831 FDPSP14324 419 aaKnown RBP12.09□□□□□ -0.47
TPM1-221ENST00000559831 VCAM1P19320 739 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 GJA5P36382 358 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 FUT2Q10981 343 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 FSTL1Q12841 308 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 SLC35G1Q2M3R5 365 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 SYDE2Q5VT97 1194 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 HOMER1Q86YM7 354 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 SPZ1Q9BXG8 430 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 RNF26Q9BY78 433 aaPredicted RBP12.09□□□□□ -0.47
TPM1-221ENST00000559831 RPAP3Q9H6T3 665 aaPredicted RBP12.09□□□□□ -0.47
TPM1-221ENST00000559831 ABT1Q9ULW3 272 aaKnown RBP12.09□□□□□ -0.47
TPM1-221ENST00000559831 KIF3AQ9Y496 699 aa12.09□□□□□ -0.47
TPM1-221ENST00000559831 V9GY48 417 aaPredicted RBP12.09□□□□□ -0.47
TPM1-221ENST00000559831 CXCL11O14625 94 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 CYTH3O43739 400 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 DEXIO95424 95 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 STAT2P52630 851 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 SH3D19Q5HYK7 790 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 LARP1BQ659C4 914 aaKnown RBP12.08□□□□□ -0.48
TPM1-221ENST00000559831 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
TPM1-221ENST00000559831 CHURC1Q8WUH1 139 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms