RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 HOOK2Q96ED9 719 aa7.21□□□□□ -1.26
USP3-215ENST00000559771 SEMA6BQ9H3T3 888 aa7.21□□□□□ -1.26
USP3-215ENST00000559771 SRRDQ9UH36 339 aa7.21□□□□□ -1.26
USP3-215ENST00000559771 DENND2AQ9ULE3 1009 aa7.21□□□□□ -1.26
USP3-215ENST00000559771 PDS5AQ29RF7 1337 aaKnown RBP7.21□□□□□ -1.26
USP3-215ENST00000559771 RANBP2P49792 3224 aaKnown RBP7.21□□□□□ -1.26
USP3-215ENST00000559771 LOC285556D6RIA3 1793 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 ATAD5Q96QE3 1844 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 CDK5RAP2Q96SN8 1893 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 MYO5AQ9Y4I1 1855 aaKnown RBP7.2□□□□□ -1.26
USP3-215ENST00000559771 A0A0G2JLL6 359 aaPredicted RBP7.2□□□□□ -1.26
USP3-215ENST00000559771 A0A1B0GUL7 405 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 CXCL11O14625 94 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 ENTPD3O75355 529 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 GNRH1P01148 92 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 CT47B1P0C2W7 299 aaPredicted RBP7.2□□□□□ -1.26
USP3-215ENST00000559771 MS4A1P11836 297 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 PTPRAP18433 802 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 PSMC4P43686 418 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 FXR1P51114 621 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP3-215ENST00000559771 TFCP2Q12800 502 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 RRP1BQ14684 758 aaKnown RBP7.2□□□□□ -1.26
USP3-215ENST00000559771 C4orf48Q5BLP8 95 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 PI16Q6UXB8 463 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 PRRT2Q7Z6L0 340 aaPredicted RBP7.2□□□□□ -1.26
USP3-215ENST00000559771 NBPF11Q86T75 865 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 CCDC84Q86UT8 332 aaPredicted RBP7.2□□□□□ -1.26
USP3-215ENST00000559771 SCYL3Q8IZE3 742 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 NEDD1Q8NHV4 660 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 FOXJ1Q92949 421 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 KRTAP17-1Q9BYP8 105 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 GABRQQ9UN88 632 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 AFG3L2Q9Y4W6 797 aa7.2□□□□□ -1.26
USP3-215ENST00000559771 GPR75-ASB3A0A0A6YYF3 556 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 GPR37O15354 613 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 SPINT1O43278 529 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 PRMT2P55345 433 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 MECOMQ03112 1051 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 PRKCZQ05513 592 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 ARHGEF6Q15052 776 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 SLC4A8Q2Y0W8 1093 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 TBC1D9Q6ZT07 1266 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 ARHGAP45Q92619 1136 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 GCC1Q96CN9 775 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 XAGE2Q96GT9 111 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 API5Q9BZZ5 524 aaKnown RBP7.19□□□□□ -1.26
USP3-215ENST00000559771 GNL3LQ9NVN8 582 aaKnown RBP7.19□□□□□ -1.26
USP3-215ENST00000559771 HMG20BQ9P0W2 317 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 ZHX2Q9Y6X8 837 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 PLXNB2O15031 1838 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 FOCADQ5VW36 1801 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 MROH7-TTC4A0A0A0MT08 1334 aa7.19□□□□□ -1.26
USP3-215ENST00000559771 PNMA6EA0A0J9YXQ4 647 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 FAM196BA6NMK8 535 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 H0YGN5 161 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 SRGAP3O43295 1099 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 TRIM27P14373 513 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 GRK4P32298 578 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 BTDP43251 543 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 USP46P62068 366 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 JAG1P78504 1218 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 KIF22Q14807 665 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 PTPRNQ16849 979 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 TREML2Q5T2D2 321 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 NSUN4Q96CB9 384 aaKnown RBP7.18□□□□□ -1.26
USP3-215ENST00000559771 ABCF2Q9UG63 623 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 ALPK3Q96L96 1907 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 MYPNQ86TC9 1320 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 DOCK3Q8IZD9 2030 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 MAST2Q6P0Q8 1798 aa7.18□□□□□ -1.26
USP3-215ENST00000559771 COL2A1P02458 1487 aaPredicted RBP7.17□□□□□ -1.26
USP3-215ENST00000559771 CTNND1O60716 968 aaKnown RBP7.17□□□□□ -1.26
USP3-215ENST00000559771 BCAR3O75815 825 aa7.17□□□□□ -1.26
USP3-215ENST00000559771 GJB1P08034 283 aa7.17□□□□□ -1.26
USP3-215ENST00000559771 CCL5P13501 91 aa7.17□□□□□ -1.26
USP3-215ENST00000559771 ARID4AP29374 1257 aaPredicted RBP7.17□□□□□ -1.26
USP3-215ENST00000559771 MCAMP43121 646 aa7.17□□□□□ -1.26
USP3-215ENST00000559771 GJA8P48165 433 aa7.17□□□□□ -1.26
USP3-215ENST00000559771 PICALMQ13492 652 aa7.17□□□□□ -1.26
USP3-215ENST00000559771 DZIP1Q86YF9 867 aaKnown RBP7.17□□□□□ -1.26
USP3-215ENST00000559771 ZGPATQ8N5A5 531 aaKnown RBP7.17□□□□□ -1.26
USP3-215ENST00000559771 PARK7Q99497 189 aaKnown RBP7.17□□□□□ -1.26
USP3-215ENST00000559771 PRO3102Q9H379 93 aa7.17□□□□□ -1.26
USP3-215ENST00000559771 SLC45A1Q9Y2W3 748 aa7.17□□□□□ -1.26
USP3-215ENST00000559771 TRIM75PA6NK02 468 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 C1QTNF9BB2RNN3 333 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 GNAI3P08754 354 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 ELNP15502 786 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 FLT3LGP49771 235 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 FCGRTP55899 365 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 MVPQ14764 893 aaKnown RBP7.16□□□□□ -1.26
USP3-215ENST00000559771 SHROOM1Q2M3G4 852 aaPredicted RBP7.16□□□□□ -1.26
USP3-215ENST00000559771 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 FASTKD5Q7L8L6 764 aaKnown RBP7.16□□□□□ -1.26
USP3-215ENST00000559771 ADGRA1Q86SQ6 560 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 ZSCAN29Q8IWY8 852 aaPredicted RBP7.16□□□□□ -1.26
USP3-215ENST00000559771 SPATA5Q8NB90 893 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 RAET1EQ8TD07 263 aa7.16□□□□□ -1.26
USP3-215ENST00000559771 OSBPL5Q9H0X9 879 aaPredicted RBP7.16□□□□□ -1.26
USP3-215ENST00000559771 DNAJC18Q9H819 358 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms