RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MORF4L1Q9UBU8 362 aa23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 TNKSO95271 1327 aa23.85■■□□□ 1.41
TSPAN3-207ENST00000559494 EPB41L2O43491 1005 aaKnown RBP23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 CNMDO75829 334 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 CTGFP29279 349 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 LACTBP83111 547 aaPredicted RBP23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 FAM110CQ1W6H9 321 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 Q3C1V9 767 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 ERO1AQ96HE7 468 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 GMCL1Q96IK5 515 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 ARHGAP39Q9C0H5 1083 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 MTMR7Q9Y216 660 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 ECM2O94769 699 aaPredicted RBP23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 BMP3P12645 472 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 ADCK5Q3MIX3 580 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 GTF3C2Q8WUA4 911 aaPredicted RBP23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 RABGAP1Q9Y3P9 1069 aa23.84■■□□□ 1.41
TSPAN3-207ENST00000559494 IFIT3O14879 490 aaKnown RBP23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 ZKSCAN1P17029 563 aaPredicted RBP23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 SLC1A4P43007 532 aa23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 SAMD1Q6SPF0 538 aaPredicted RBP23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 IGDCC4Q8TDY8 1250 aa23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 ATG4CQ96DT6 458 aa23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 PAGR1Q9BTK6 254 aa23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 BTBD7Q9P203 1132 aa23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 PPP1R9AQ9ULJ8 1098 aa23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 ADAMTS5Q9UNA0 930 aa23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 SNX14Q9Y5W7 946 aa23.83■■□□□ 1.4
TSPAN3-207ENST00000559494 DOCK3Q8IZD9 2030 aa23.82■■□□□ 1.4
TSPAN3-207ENST00000559494 PNMA1Q8ND90 353 aa23.82■■□□□ 1.4
TSPAN3-207ENST00000559494 GPRC5AQ8NFJ5 357 aa23.82■■□□□ 1.4
TSPAN3-207ENST00000559494 DCAF4Q8WV16 495 aa23.82■■□□□ 1.4
TSPAN3-207ENST00000559494 NEK1Q96PY6 1258 aa23.82■■□□□ 1.4
TSPAN3-207ENST00000559494 SENP2Q9HC62 589 aa23.82■■□□□ 1.4
TSPAN3-207ENST00000559494 MYPNQ86TC9 1320 aa23.82■■□□□ 1.4
TSPAN3-207ENST00000559494 PARP14Q460N5 1801 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 TMEM232C9JQI7 657 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 PRC1O43663 620 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 SEC24BO95487 1268 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 PDHBP11177 359 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 MCM5P33992 734 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 PSMC4P43686 418 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 ERVK-9P63128 1117 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 ERVK-24P63145 666 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 KIF22Q14807 665 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 IFIT1BQ5T764 474 aaKnown RBP23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 KCTD1Q719H9 257 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 CTU1Q7Z7A3 348 aaKnown RBP23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 SLF1Q9BQI6 1058 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 KAT14Q9H8E8 782 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 GPHNQ9NQX3 736 aaPredicted RBP23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 FEM1BQ9UK73 627 aa23.81■■□□□ 1.4
TSPAN3-207ENST00000559494 ZSWIM8A7E2V4 1837 aa23.8■■□□□ 1.4
TSPAN3-207ENST00000559494 KRT32Q14532 448 aa23.8■■□□□ 1.4
TSPAN3-207ENST00000559494 OTOP1Q7RTM1 612 aa23.8■■□□□ 1.4
TSPAN3-207ENST00000559494 PRPF38AQ8NAV1 312 aaKnown RBP23.8■■□□□ 1.4
TSPAN3-207ENST00000559494 TRIM47Q96LD4 638 aa23.8■■□□□ 1.4
TSPAN3-207ENST00000559494 EFCC1Q9HA90 598 aa23.8■■□□□ 1.4
TSPAN3-207ENST00000559494 VWA5AO00534 786 aa23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 SNHG28P0DPA3 235 aa23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 EXOSC10Q01780 885 aaKnown RBP23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 WTAPQ15007 396 aa23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 C8orf34Q49A92 452 aa23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 TMEM67Q5HYA8 995 aa23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 TTBK2Q6IQ55 1244 aa23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 ISY1Q9ULR0 285 aaKnown RBP23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 TRIM17Q9Y577 477 aa23.79■■□□□ 1.4
TSPAN3-207ENST00000559494 ERICH2A1L162 156 aa23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 PLA2G6O60733 806 aa23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 FMNL1O95466 1100 aaPredicted RBP23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 SART3Q15020 963 aaKnown RBP23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 CCDC96Q2M329 555 aa23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 MB21D1Q8N884 522 aa23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 CHURC1Q8WUH1 139 aa23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 KIFC2Q96AC6 838 aa23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 MTA3Q9BTC8 594 aa23.78■■□□□ 1.4
TSPAN3-207ENST00000559494 FRMPD2Q68DX3 1309 aaPredicted RBP23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 STAT2P52630 851 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 ZNF543Q08ER8 600 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 TMEM132BQ14DG7 1078 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 ARHGEF6Q15052 776 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 DHX32Q7L7V1 743 aaKnown RBP23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 FAM160B2Q86V87 743 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 REPS2Q8NFH8 660 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 TMEM87BQ96K49 555 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 LRRC2Q9BYS8 371 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 PORCNQ9H237 461 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 LY9Q9HBG7 655 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 GPCPD1Q9NPB8 672 aa23.77■■□□□ 1.4
TSPAN3-207ENST00000559494 MGAMO43451 1857 aa23.76■■□□□ 1.39
TSPAN3-207ENST00000559494 SH2B2O14492 632 aaPredicted RBP23.76■■□□□ 1.39
TSPAN3-207ENST00000559494 FCGRTP55899 365 aa23.76■■□□□ 1.39
TSPAN3-207ENST00000559494 BTNL9Q6UXG8 535 aa23.76■■□□□ 1.39
TSPAN3-207ENST00000559494 JAKMIP1Q96N16 626 aaKnown RBP23.76■■□□□ 1.39
TSPAN3-207ENST00000559494 COL11A1P12107 1806 aaPredicted RBP23.75■■□□□ 1.39
TSPAN3-207ENST00000559494 GOLGA8HP0CJ92 632 aa23.75■■□□□ 1.39
TSPAN3-207ENST00000559494 CPA1P15085 419 aa23.75■■□□□ 1.39
TSPAN3-207ENST00000559494 SLC16A2P36021 539 aa23.75■■□□□ 1.39
TSPAN3-207ENST00000559494 IKQ13123 557 aaPredicted RBP23.75■■□□□ 1.39
TSPAN3-207ENST00000559494 TCEANC2Q96MN5 208 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms