RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 XRCC5P13010 732 aaKnown RBP5.16□□□□□ -1.58
SNX1-205ENST00000559339 GSPT1P15170 499 aaKnown RBP5.16□□□□□ -1.58
SNX1-205ENST00000559339 PDE4AP27815 886 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 CTGFP29279 349 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 RGS2P41220 211 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 RGS19P49795 217 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 STAT2P52630 851 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 HAND2P61296 217 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 CAP1Q01518 475 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 Q3C1V9 767 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 CCDC178Q5BJE1 867 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 FAM83BQ5T0W9 1011 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 AKNAD1Q5T1N1 836 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 PLEKHH3Q7Z736 793 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 DPP9Q86TI2 863 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 NCAPG2Q86XI2 1143 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 CLEC10AQ8IUN9 316 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 SIAH1Q8IUQ4 282 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 CHURC1Q8WUH1 139 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 STAG1Q8WVM7 1258 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 MKL1Q969V6 931 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 TTC14Q96N46 770 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 SLF1Q9BQI6 1058 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.16□□□□□ -1.58
SNX1-205ENST00000559339 KRT23Q9C075 422 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 SPATC1LQ9H0A9 340 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 RNF208Q9H0X6 261 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 MROH8Q9H579 483 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 CNNM2Q9H8M5 875 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 FEM1BQ9UK73 627 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 PPP1R9AQ9ULJ8 1098 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 GABRQQ9UN88 632 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 MYH1P12882 1939 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 RAD50Q92878 1312 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 LAMB1P07942 1786 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 PLIN4Q96Q06 1357 aa5.16□□□□□ -1.58
SNX1-205ENST00000559339 IGKV6D-41A0A0C4DH26 115 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 ERICH2A1L162 156 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 SLC15A5A6NIM6 579 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 VWA5AO00534 786 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 FOXP2O15409 715 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 ZBED4O75132 1171 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 INHAP05111 366 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 GJB1P08034 283 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 PRR29P0C7W0 189 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 TOP1P11387 765 aaKnown RBP5.15□□□□□ -1.59
SNX1-205ENST00000559339 FCER1AP12319 257 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 ELNP15502 786 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 ZKSCAN1P17029 563 aaPredicted RBP5.15□□□□□ -1.59
SNX1-205ENST00000559339 ERCC3P19447 782 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 CYP2B6P20813 491 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 CHMLP26374 656 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 STAT3P40763 770 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 MAP2K5Q13163 448 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 KCTD2Q14681 263 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 MFSD14CQ5VZR4 134 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 SLFN13Q68D06 897 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 FAM160B2Q86V87 743 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 DGKHQ86XP1 1220 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 ABRAQ8N0Z2 381 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 LRRC47Q8N1G4 583 aaKnown RBP5.15□□□□□ -1.59
SNX1-205ENST00000559339 SHCBP1Q8NEM2 672 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 KIFC2Q96AC6 838 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 ATG4CQ96DT6 458 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 GMCL1Q96IK5 515 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 APBA2Q99767 749 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 UBAC1Q9BSL1 405 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 MOV10L1Q9BXT6 1211 aaKnown RBP5.15□□□□□ -1.59
SNX1-205ENST00000559339 TEX13BQ9BXU2 312 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 PORCNQ9H237 461 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 HMX1Q9NP08 348 aaPredicted RBP5.15□□□□□ -1.59
SNX1-205ENST00000559339 TCP11L1Q9NUJ3 509 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 BTBD7Q9P203 1132 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 GJD2Q9UKL4 321 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 PNMA2Q9UL42 364 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.15□□□□□ -1.59
SNX1-205ENST00000559339 RPTORQ8N122 1335 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 NAV1Q8NEY1 1877 aa5.15□□□□□ -1.59
SNX1-205ENST00000559339 HTTP42858 3142 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 DDX60LQ5H9U9 1706 aaKnown RBP5.14□□□□□ -1.59
SNX1-205ENST00000559339 SIPA1L1O43166 1804 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 BRCA2P51587 3418 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 TMEM232C9JQI7 657 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 SGSM2O43147 1006 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 NMT2O60551 498 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 MSCO60682 206 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 PEX10O60683 326 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 KDM4AO75164 1064 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 CNMDO75829 334 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 TFRCP02786 760 aaKnown RBP5.14□□□□□ -1.59
SNX1-205ENST00000559339 CCL5P13501 91 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 EN2P19622 333 aaPredicted RBP5.14□□□□□ -1.59
SNX1-205ENST00000559339 PTPREP23469 700 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 MCCP23508 829 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 ADORA2AP29274 412 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 GJA8P48165 433 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 SLC4A3P48751 1232 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 OAZ1P54368 228 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 GRB14Q14449 540 aa5.14□□□□□ -1.59
SNX1-205ENST00000559339 TMEM132BQ14DG7 1078 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms