RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CRNKL1Q9BZJ0 848 aaKnown RBP7.01□□□□□ -1.29
USP3-212ENST00000559276 SPATC1LQ9H0A9 340 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 CABP5Q9NP86 173 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 MTMR10Q9NXD2 777 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 ADAMTS5Q9UNA0 930 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 COG6Q9Y2V7 657 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 TMX2Q9Y320 296 aa7.01□□□□□ -1.29
USP3-212ENST00000559276 SPTBN5Q9NRC6 3674 aaKnown RBP7□□□□□ -1.29
USP3-212ENST00000559276 MBD4O95243 580 aa7□□□□□ -1.29
USP3-212ENST00000559276 ATP5JP18859 108 aa7□□□□□ -1.29
USP3-212ENST00000559276 CDK8P49336 464 aa7□□□□□ -1.29
USP3-212ENST00000559276 ATP2B2Q01814 1243 aa7□□□□□ -1.29
USP3-212ENST00000559276 TMEM132BQ14DG7 1078 aa7□□□□□ -1.29
USP3-212ENST00000559276 SNX17Q15036 470 aa7□□□□□ -1.29
USP3-212ENST00000559276 HSP90AB4PQ58FF6 505 aa7□□□□□ -1.29
USP3-212ENST00000559276 PRAMEF19Q5SWL8 479 aa7□□□□□ -1.29
USP3-212ENST00000559276 WDR78Q5VTH9 848 aa7□□□□□ -1.29
USP3-212ENST00000559276 MFSD14CQ5VZR4 134 aa7□□□□□ -1.29
USP3-212ENST00000559276 OLFML2BQ68BL8 750 aa7□□□□□ -1.29
USP3-212ENST00000559276 TMEM179Q6ZVK1 233 aa7□□□□□ -1.29
USP3-212ENST00000559276 SKAP1Q86WV1 359 aa7□□□□□ -1.29
USP3-212ENST00000559276 CCAR1Q8IX12 1150 aaKnown RBP7□□□□□ -1.29
USP3-212ENST00000559276 SPICE1Q8N0Z3 855 aa7□□□□□ -1.29
USP3-212ENST00000559276 CLASRPQ8N2M8 674 aaKnown RBP7□□□□□ -1.29
USP3-212ENST00000559276 DEFB123Q8N688 67 aa7□□□□□ -1.29
USP3-212ENST00000559276 SHCBP1Q8NEM2 672 aa7□□□□□ -1.29
USP3-212ENST00000559276 REPS2Q8NFH8 660 aa7□□□□□ -1.29
USP3-212ENST00000559276 ATG4CQ96DT6 458 aa7□□□□□ -1.29
USP3-212ENST00000559276 HAUS7Q99871 368 aa7□□□□□ -1.29
USP3-212ENST00000559276 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
USP3-212ENST00000559276 SENP6Q9GZR1 1112 aaPredicted RBP7□□□□□ -1.29
USP3-212ENST00000559276 PUS7LQ9H0K6 701 aaKnown RBP7□□□□□ -1.29
USP3-212ENST00000559276 BOLA2Q9H3K6 86 aa7□□□□□ -1.29
USP3-212ENST00000559276 VCPKMTQ9H867 229 aa7□□□□□ -1.29
USP3-212ENST00000559276 FBXO28Q9NVF7 368 aa7□□□□□ -1.29
USP3-212ENST00000559276 PAG1Q9NWQ8 432 aa7□□□□□ -1.29
USP3-212ENST00000559276 HOXC10Q9NYD6 342 aa7□□□□□ -1.29
USP3-212ENST00000559276 DDX19BQ9UMR2 479 aa7□□□□□ -1.29
USP3-212ENST00000559276 SMCHD1A6NHR9 2005 aa7□□□□□ -1.29
USP3-212ENST00000559276 USP17L12C9JPN9 530 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 USP17L21D6R901 530 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 POTEB2H3BUK9 544 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 DNM1LO00429 736 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 MPHOSPH10O00566 681 aaKnown RBP6.99□□□□□ -1.29
USP3-212ENST00000559276 STRNO43815 780 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 GLRX3O76003 335 aaKnown RBP6.99□□□□□ -1.29
USP3-212ENST00000559276 IFIT2P09913 472 aaKnown RBP6.99□□□□□ -1.29
USP3-212ENST00000559276 EEF2P13639 858 aaKnown RBP6.99□□□□□ -1.29
USP3-212ENST00000559276 CNGA1P29973 690 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 RBM25P49756 843 aaKnown RBP6.99□□□□□ -1.29
USP3-212ENST00000559276 ATN1P54259 1190 aaPredicted RBP6.99□□□□□ -1.29
USP3-212ENST00000559276 UBE3CQ15386 1083 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 GJC2Q5T442 439 aaPredicted RBP6.99□□□□□ -1.29
USP3-212ENST00000559276 ANO1Q5XXA6 986 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 CTR9Q6PD62 1173 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 C16orf86Q6ZW13 317 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 HSCBQ8IWL3 235 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 SLC17A8Q8NDX2 589 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 MAML3Q96JK9 1138 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 GUCD1Q96NT3 240 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 TANGO6Q9C0B7 1094 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 ATP8A2Q9NTI2 1148 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 SWAP70Q9UH65 585 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 IVNS1ABPQ9Y6Y0 642 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 VCANP13611 3396 aa6.99□□□□□ -1.29
USP3-212ENST00000559276 DLL1O00548 723 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 WDR46O15213 610 aaKnown RBP6.98□□□□□ -1.29
USP3-212ENST00000559276 SEPT4O43236 478 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 RRP9O43818 475 aaKnown RBP6.98□□□□□ -1.29
USP3-212ENST00000559276 SMARCA5O60264 1052 aaPredicted RBP6.98□□□□□ -1.29
USP3-212ENST00000559276 MSCO60682 206 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 RAB11FIP3O75154 756 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 FLOT1O75955 427 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 PGK2P07205 417 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 ATXN8OSP0DMR3 200 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 TAL1P17542 331 aaPredicted RBP6.98□□□□□ -1.29
USP3-212ENST00000559276 ITGB8P26012 769 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 RTP1P59025 263 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 ICA1Q05084 483 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 ZNF792Q3KQV3 632 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 SLC39A5Q6ZMH5 540 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 SH3RF1Q7Z6J0 888 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 DPP9Q86TI2 863 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 SMC5Q8IY18 1101 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 ABRAQ8N0Z2 381 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 CCDC17Q96LX7 622 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 GBP4Q96PP9 640 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 C22orf23Q9BZE7 217 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 MROH8Q9H579 483 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 ZNF214Q9UL59 606 aaPredicted RBP6.98□□□□□ -1.29
USP3-212ENST00000559276 STXBP5LQ9Y2K9 1186 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 PRUNE2Q8WUY3 3088 aa6.98□□□□□ -1.29
USP3-212ENST00000559276 IGKV6D-41A0A0C4DH26 115 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 TRIM43BA6NCK2 446 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 GSG1L2A8MUP6 293 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 VWA5AO00534 786 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 TRAK2O60296 914 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 HMMRO75330 724 aa6.97□□□□□ -1.29
USP3-212ENST00000559276 ZNF865P0CJ78 1059 aaPredicted RBP6.97□□□□□ -1.29
USP3-212ENST00000559276 RASA1P20936 1047 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms