RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 FAM47AQ5JRC9 791 aa14.84□□□□□ -0.03
TRPM1-210ENST00000559179 C9orf50Q5SZB4 431 aa14.84□□□□□ -0.03
TRPM1-210ENST00000559179 RPAP2Q8IXW5 612 aaPredicted RBP14.84□□□□□ -0.03
TRPM1-210ENST00000559179 STK11IPQ8N1F8 1099 aa14.84□□□□□ -0.03
TRPM1-210ENST00000559179 COL25A1Q9BXS0 654 aaPredicted RBP14.84□□□□□ -0.03
TRPM1-210ENST00000559179 CNPY2Q9Y2B0 182 aa14.84□□□□□ -0.03
TRPM1-210ENST00000559179 SLC4A4Q9Y6R1 1079 aa14.84□□□□□ -0.03
TRPM1-210ENST00000559179 TCRBV5S4A2TA0A5A2 114 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
TRPM1-210ENST00000559179 RAB11FIP3O75154 756 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 PGK1P00558 417 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 RAG1P15918 1043 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 KCNA4P22459 653 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 ADD2P35612 726 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 STAT3P40763 770 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 SLFNL1Q499Z3 407 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 ZSCAN25Q6NSZ9 544 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 SH3RF1Q7Z6J0 888 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 DDX11Q96FC9 970 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 CDX2Q99626 313 aaPredicted RBP14.83□□□□□ -0.04
TRPM1-210ENST00000559179 SEMA6BQ9H3T3 888 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 KANSL2Q9H9L4 492 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 TACC3Q9Y6A5 838 aa14.83□□□□□ -0.04
TRPM1-210ENST00000559179 CLTBP09497 229 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 FAM83BQ5T0W9 1011 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 C12orf60Q5U649 245 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 SIAH1Q8IUQ4 282 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 VTI1AQ96AJ9 217 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 RNPC3Q96LT9 517 aaKnown RBP14.82□□□□□ -0.04
TRPM1-210ENST00000559179 TINF2Q9BSI4 451 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 PDLIM7Q9NR12 457 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 TMEM39AQ9NV64 488 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 FBXO28Q9NVF7 368 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 RLFQ13129 1914 aa14.82□□□□□ -0.04
TRPM1-210ENST00000559179 ZNFX1Q9P2E3 1918 aaKnown RBP14.82□□□□□ -0.04
TRPM1-210ENST00000559179 BAZ2AQ9UIF9 1905 aaKnown RBP14.82□□□□□ -0.04
TRPM1-210ENST00000559179 TRIM43BA6NCK2 446 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 AKR1A1P14550 325 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 COPB2P35606 906 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 RIOX2Q8IUF8 465 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 MAFAQ8NHW3 353 aaPredicted RBP14.81□□□□□ -0.04
TRPM1-210ENST00000559179 MYLIPQ8WY64 445 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 TRIM43Q96BQ3 446 aaPredicted RBP14.81□□□□□ -0.04
TRPM1-210ENST00000559179 CHMP4BQ9H444 224 aaKnown RBP14.81□□□□□ -0.04
TRPM1-210ENST00000559179 MKNK2Q9HBH9 465 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 NRBP1Q9UHY1 535 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 ISY1Q9ULR0 285 aaKnown RBP14.81□□□□□ -0.04
TRPM1-210ENST00000559179 DDX19BQ9UMR2 479 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 COG6Q9Y2V7 657 aa14.81□□□□□ -0.04
TRPM1-210ENST00000559179 LTBP2Q14767 1821 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 DCDC2CA8MYV0 355 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 MINDY4BA8MYZ0 360 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 VWA5AO00534 786 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 FOSL2P15408 326 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 ATP5JP18859 108 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 SMAD3P84022 425 aaKnown RBP14.8□□□□□ -0.04
TRPM1-210ENST00000559179 C16orf86Q6ZW13 317 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 STARD7Q9NQZ5 370 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 ZHX1Q9UKY1 873 aaPredicted RBP14.8□□□□□ -0.04
TRPM1-210ENST00000559179 PPP1R9AQ9ULJ8 1098 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 PHF24Q9UPV7 400 aa14.8□□□□□ -0.04
TRPM1-210ENST00000559179 A0A0G2JMZ2 1700 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 A0A1W2PQ45 241 aaPredicted RBP14.79□□□□□ -0.04
TRPM1-210ENST00000559179 A0A1W2PQY0 241 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 SMIM22K7EJ46 135 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 IGHA2P01877 340 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 COL11A1P12107 1806 aaPredicted RBP14.79□□□□□ -0.04
TRPM1-210ENST00000559179 TAL1P17542 331 aaPredicted RBP14.79□□□□□ -0.04
TRPM1-210ENST00000559179 FPGSQ05932 587 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 SNX17Q15036 470 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 UBE3CQ15386 1083 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 CPXCR1Q8N123 301 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 NUP133Q8WUM0 1156 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 HAUS7Q99871 368 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 FAM184BQ9ULE4 1060 aa14.79□□□□□ -0.04
TRPM1-210ENST00000559179 DIS3Q9Y2L1 958 aaKnown RBP14.79□□□□□ -0.04
TRPM1-210ENST00000559179 ZBED9Q6R2W3 1325 aa14.78□□□□□ -0.04
TRPM1-210ENST00000559179 ZBED4O75132 1171 aa14.78□□□□□ -0.04
TRPM1-210ENST00000559179 ZNF792Q3KQV3 632 aa14.78□□□□□ -0.04
TRPM1-210ENST00000559179 C1orf53Q5VUE5 145 aa14.78□□□□□ -0.04
TRPM1-210ENST00000559179 SNRNP48Q6IEG0 339 aaKnown RBP14.78□□□□□ -0.04
TRPM1-210ENST00000559179 LENG1Q96BZ8 264 aaPredicted RBP14.78□□□□□ -0.04
TRPM1-210ENST00000559179 NUP88Q99567 741 aaPredicted RBP14.78□□□□□ -0.04
TRPM1-210ENST00000559179 SLF1Q9BQI6 1058 aa14.78□□□□□ -0.04
TRPM1-210ENST00000559179 SPC25Q9HBM1 224 aa14.78□□□□□ -0.04
TRPM1-210ENST00000559179 ARPP21Q9UBL0 812 aaPredicted RBP14.78□□□□□ -0.04
TRPM1-210ENST00000559179 PLXNA1Q9UIW2 1896 aa14.78□□□□□ -0.04
TRPM1-210ENST00000559179 SMCHD1A6NHR9 2005 aa14.77□□□□□ -0.04
TRPM1-210ENST00000559179 APPP05067 770 aa14.77□□□□□ -0.05
TRPM1-210ENST00000559179 ACLYP53396 1101 aa14.77□□□□□ -0.05
TRPM1-210ENST00000559179 ZNF444Q8N0Y2 327 aaPredicted RBP14.77□□□□□ -0.05
TRPM1-210ENST00000559179 ANKRD35Q8N283 1001 aa14.77□□□□□ -0.05
TRPM1-210ENST00000559179 KIFC2Q96AC6 838 aa14.77□□□□□ -0.05
TRPM1-210ENST00000559179 TEX13BQ9BXU2 312 aa14.77□□□□□ -0.05
TRPM1-210ENST00000559179 CLIP2Q9UDT6 1046 aa14.77□□□□□ -0.05
TRPM1-210ENST00000559179 ADAMTS5Q9UNA0 930 aa14.77□□□□□ -0.05
TRPM1-210ENST00000559179 COL6A3P12111 3177 aa14.77□□□□□ -0.05
TRPM1-210ENST00000559179 F5H6K3 240 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms