RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 DHX16O60231 1041 aaKnown RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 PDHBP11177 359 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 IRX3P78415 501 aaPredicted RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 HTRA3P83110 453 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 ZNF543Q08ER8 600 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 TROAPQ12815 778 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 STK3Q13188 491 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 GRM4Q14833 912 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 RTN1Q16799 776 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 ASPRV1Q53RT3 343 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 FAM83BQ5T0W9 1011 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 GPATCH4Q5T3I0 446 aaKnown RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 KCTD1Q719H9 257 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 RASGRP2Q7LDG7 609 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 HSCBQ8IWL3 235 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 ZNF274Q96GC6 653 aaPredicted RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 ZSCAN31Q96LW9 406 aaPredicted RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 NUP88Q99567 741 aaPredicted RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 LARP6Q9BRS8 491 aaKnown RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 SLKQ9H2G2 1235 aaPredicted RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 RPAP3Q9H6T3 665 aaPredicted RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 GPCPD1Q9NPB8 672 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 RBM28Q9NW13 759 aaKnown RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 LIMCH1Q9UPQ0 1083 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 AGTPBP1Q9UPW5 1226 aa7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 FRMPD2Q68DX3 1309 aaPredicted RBP7.69□□□□□ -1.18
CHRNA3-204ENST00000559002 FAM155AB1AL88 458 aaPredicted RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L15C9J2P7 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L13C9JLJ4 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L11C9JVI0 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L18D6R9N7 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L22D6RA61 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L17D6RBQ6 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L19D6RCP7 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L20D6RJB6 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 CPLX1O14810 134 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 FLOT1O75955 427 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 CD2BP2O95400 341 aaKnown RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 GOLGA8HP0CJ92 632 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 SNHG28P0DPA3 235 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 OSBPP22059 807 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 PDIA3P30101 505 aaKnown RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 GNAQP50148 359 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 STAT2P52630 851 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 EVCP57679 992 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 INHBEP58166 350 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 CCT2P78371 535 aaKnown RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 KIF23Q02241 960 aaPredicted RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 USP17L24Q0WX57 530 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 PPP2R5BQ15173 497 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 KIAA1755Q5JYT7 1200 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 TREML2Q5T2D2 321 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 OTUD7BQ6GQQ9 843 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 CPLX2Q6PUV4 134 aaKnown RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 SAMD1Q6SPF0 538 aaPredicted RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 ANKRD23Q86SG2 305 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 FAM160B2Q86V87 743 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 FANCBQ8NB91 859 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 CHURC1Q8WUH1 139 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 BRI3BPQ8WY22 251 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 MS4A4AQ96JQ5 239 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 MAP3K14Q99558 947 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 SH2B1Q9NRF2 756 aaPredicted RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 FEM1BQ9UK73 627 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 PNMA3Q9UL41 463 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 TPCN1Q9ULQ1 816 aa7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 CTDP1Q9Y5B0 961 aaPredicted RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 WDR33Q9C0J8 1336 aaKnown RBP7.68□□□□□ -1.18
CHRNA3-204ENST00000559002 BTBD19C9JJ37 291 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 KLRF2D3W0D1 207 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 PDHXO00330 501 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 PFKFB2O60825 505 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 AOC2O75106 756 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 ANP32AP39687 249 aaKnown RBP7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 VEGFBP49765 207 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 MOGSQ13724 837 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 BECN1Q14457 450 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 ME3Q16798 604 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 SYDE2Q5VT97 1194 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 CATSPERGQ6ZRH7 1159 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 TMTC3Q6ZXV5 915 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 REM2Q8IYK8 340 aaPredicted RBP7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 STAG2Q8N3U4 1231 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 GTF3C6Q969F1 213 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 KIFC2Q96AC6 838 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 PARK7Q99497 189 aaKnown RBP7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 SLF1Q9BQI6 1058 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 LZTS2Q9BRK4 669 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 NCOA5Q9HCD5 579 aaKnown RBP7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 MAD2L2Q9UI95 211 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 HPS5Q9UPZ3 1129 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 NID2Q14112 1375 aa7.67□□□□□ -1.18
CHRNA3-204ENST00000559002 PHIPQ8WWQ0 1821 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 MYH4Q9Y623 1939 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 TESPA1A2RU30 521 aaPredicted RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 PALM3A6NDB9 673 aaPredicted RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 K7ELQ4 463 aaPredicted RBP7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 PLA2G6O60733 806 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 ZBED4O75132 1171 aa7.66□□□□□ -1.18
CHRNA3-204ENST00000559002 CDKL5O76039 1030 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms