RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 PTPREP23469 700 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 RGS2P41220 211 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 NOVP48745 357 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 MAP2K5Q13163 448 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 GRB14Q14449 540 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 GMCL1P1Q8NEA9 526 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 RILPL2Q969X0 211 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 ATG4CQ96DT6 458 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 MOV10L1Q9BXT6 1211 aaKnown RBP13.35□□□□□ -0.27
BMP4-204ENST00000558961 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 BIN2Q9UBW5 565 aaPredicted RBP13.35□□□□□ -0.27
BMP4-204ENST00000558961 TACC3Q9Y6A5 838 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 PLXNA1Q9UIW2 1896 aa13.35□□□□□ -0.27
BMP4-204ENST00000558961 ZNFX1Q9P2E3 1918 aaKnown RBP13.35□□□□□ -0.27
BMP4-204ENST00000558961 SLC15A5A6NIM6 579 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 F5H6K3 240 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 HIP1O00291 1037 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 TTLL1O95922 423 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 NDUFB10O96000 172 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 IGHA2P01877 340 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 FGAP02671 866 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 TSPY3P0CV98 308 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 TSPY8P0CW00 308 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
BMP4-204ENST00000558961 KLRC3Q07444 240 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 FAM83BQ5T0W9 1011 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
BMP4-204ENST00000558961 REPS2Q8NFH8 660 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
BMP4-204ENST00000558961 CRISPLD2Q9H0B8 497 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 FBXO28Q9NVF7 368 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 ZNF214Q9UL59 606 aaPredicted RBP13.34□□□□□ -0.27
BMP4-204ENST00000558961 PPP1R9AQ9ULJ8 1098 aa13.34□□□□□ -0.27
BMP4-204ENST00000558961 VWA5AO00534 786 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 STRNO43815 780 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 SGPL1O95470 568 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 PCP11498 1178 aaKnown RBP13.33□□□□□ -0.28
BMP4-204ENST00000558961 GSPT1P15170 499 aaKnown RBP13.33□□□□□ -0.28
BMP4-204ENST00000558961 CYP2B6P20813 491 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 CTDSPL2Q05D32 466 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 TTC22Q5TAA0 569 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 PRPF38BQ5VTL8 546 aaKnown RBP13.33□□□□□ -0.28
BMP4-204ENST00000558961 ABRAQ8N0Z2 381 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.33□□□□□ -0.28
BMP4-204ENST00000558961 CLIP2Q9UDT6 1046 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 RPTORQ8N122 1335 aa13.33□□□□□ -0.28
BMP4-204ENST00000558961 ZKSCAN1P17029 563 aaPredicted RBP13.32□□□□□ -0.28
BMP4-204ENST00000558961 ERCC3P19447 782 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 TFAP4Q01664 338 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 TRIM32Q13049 653 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 TMEM132BQ14DG7 1078 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 CCL14Q16627 93 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 RIOX2Q8IUF8 465 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 NBPF3Q9H094 633 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 MROH8Q9H579 483 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 HMX1Q9NP08 348 aaPredicted RBP13.32□□□□□ -0.28
BMP4-204ENST00000558961 IL17RBQ9NRM6 502 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 DIAPH3Q9NSV4 1193 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 IVNS1ABPQ9Y6Y0 642 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 ALPK3Q96L96 1907 aa13.32□□□□□ -0.28
BMP4-204ENST00000558961 TSPY2A6NKD2 308 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 ATP2A1O14983 1001 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 SLC25A27O95847 323 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 NT5C2P49902 561 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 LRRC47Q8N1G4 583 aaKnown RBP13.31□□□□□ -0.28
BMP4-204ENST00000558961 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 GMCL1Q96IK5 515 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 DEFB118Q96PH6 123 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 NUP88Q99567 741 aaPredicted RBP13.31□□□□□ -0.28
BMP4-204ENST00000558961 SLF1Q9BQI6 1058 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 DSCC1Q9BVC3 393 aa13.31□□□□□ -0.28
BMP4-204ENST00000558961 CWC22Q9HCG8 908 aaKnown RBP13.31□□□□□ -0.28
BMP4-204ENST00000558961 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
BMP4-204ENST00000558961 ADORA2AP29274 412 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 COPB2P35606 906 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 CACNB2Q08289 660 aaPredicted RBP13.3□□□□□ -0.28
BMP4-204ENST00000558961 WDR78Q5VTH9 848 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 OLFML2BQ68BL8 750 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 CWC27Q6UX04 472 aaKnown RBP13.3□□□□□ -0.28
BMP4-204ENST00000558961 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.3□□□□□ -0.28
BMP4-204ENST00000558961 PRPF38AQ8NAV1 312 aaKnown RBP13.3□□□□□ -0.28
BMP4-204ENST00000558961 NPLOC4Q8TAT6 608 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 INCENPQ9NQS7 918 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 TCP11L1Q9NUJ3 509 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 FLRT1Q9NZU1 646 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 RAD50Q92878 1312 aa13.3□□□□□ -0.28
BMP4-204ENST00000558961 NMT2O60551 498 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 PLA2G6O60733 806 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 PLS1Q14651 629 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 AKNAD1Q5T1N1 836 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 TBC1D10CQ8IV04 446 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 ANKLE1Q8NAG6 615 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 TEX13BQ9BXU2 312 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 IL25Q9H293 177 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 FEM1BQ9UK73 627 aa13.29□□□□□ -0.28
BMP4-204ENST00000558961 RAD21O60216 631 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms