RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 CYBAP13498 195 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 ZKSCAN1P17029 563 aaPredicted RBP6.66□□□□□ -1.34
SMAD3-209ENST00000558894 ERCC3P19447 782 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 CYP2C19P33261 490 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 CCNA1P78396 465 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 ICA1Q05084 483 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 ZMYM1Q5SVZ6 1142 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 IFNL3Q8IZI9 196 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 MKL1Q969V6 931 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 CRBNQ96SW2 442 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 GDF15Q99988 308 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 TANGO6Q9C0B7 1094 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 NBPF3Q9H094 633 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 C11orf49Q9H6J7 331 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 KANSL2Q9H9L4 492 aa6.66□□□□□ -1.34
SMAD3-209ENST00000558894 ZNF214Q9UL59 606 aaPredicted RBP6.66□□□□□ -1.34
SMAD3-209ENST00000558894 LAMA2P24043 3122 aaKnown RBP6.65□□□□□ -1.34
SMAD3-209ENST00000558894 PATL2C9JE40 543 aaKnown RBP6.65□□□□□ -1.34
SMAD3-209ENST00000558894 F5H6K3 240 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 VWA5AO00534 786 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 STRNO43815 780 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 FLOT1O75955 427 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 ZFYP08048 801 aaPredicted RBP6.65□□□□□ -1.34
SMAD3-209ENST00000558894 ADORA2AP29274 412 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 BMP8BP34820 402 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 KLRC3Q07444 240 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 HDAC1Q13547 482 aaPredicted RBP6.65□□□□□ -1.34
SMAD3-209ENST00000558894 LRRC26Q2I0M4 334 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 OLFML2BQ68BL8 750 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 ABRAQ8N0Z2 381 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 MB21D1Q8N884 522 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 MAML3Q96JK9 1138 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 NUP88Q99567 741 aaPredicted RBP6.65□□□□□ -1.34
SMAD3-209ENST00000558894 MROH8Q9H579 483 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 ARHGEF10LQ9HCE6 1279 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 NYAP2Q9P242 653 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 STAP2Q9UGK3 403 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 DDX20Q9UHI6 824 aaKnown RBP6.65□□□□□ -1.34
SMAD3-209ENST00000558894 RIPK3Q9Y572 518 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 NR2E3Q9Y5X4 410 aa6.65□□□□□ -1.34
SMAD3-209ENST00000558894 CDH23Q9H251 3354 aa6.65□□□□□ -1.35
SMAD3-209ENST00000558894 PLIN4Q96Q06 1357 aa6.65□□□□□ -1.35
SMAD3-209ENST00000558894 A0A1W2PPC1 479 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 MINDY4BA8MYZ0 360 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 PRDM1O75626 825 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
SMAD3-209ENST00000558894 NDUFB10O96000 172 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 FGRP09769 529 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 MX1P20591 662 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 NOVP48745 357 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 ZNF792Q3KQV3 632 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 PRAMEF19Q5SWL8 479 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 FAM83BQ5T0W9 1011 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 RIOX2Q8IUF8 465 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 C7orf61Q8IZ16 206 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 STK11IPQ8N1F8 1099 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 CEP95Q96GE4 821 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 FGD4Q96M96 766 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 SH2D4AQ9H788 454 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 INCENPQ9NQS7 918 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 IL17RBQ9NRM6 502 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 PPP1R9AQ9ULJ8 1098 aa6.64□□□□□ -1.35
SMAD3-209ENST00000558894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMAD3-209ENST00000558894 DNAJC25-GNG10A0A024R161 153 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 ATP2A1O14983 1001 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 ZNF536O15090 1300 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 PGK2P07205 417 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 ZNF865P0CJ78 1059 aaPredicted RBP6.63□□□□□ -1.35
SMAD3-209ENST00000558894 TAL1P17542 331 aaPredicted RBP6.63□□□□□ -1.35
SMAD3-209ENST00000558894 SYN1P17600 705 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 GNAT2P19087 354 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 STAT3P40763 770 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 ATP2B2Q01814 1243 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 SNX17Q15036 470 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 VPS53Q5VIR6 699 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 WDR78Q5VTH9 848 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 MFSD14CQ5VZR4 134 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 CCDC129Q6ZRS4 1044 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMAD3-209ENST00000558894 NCAPG2Q86XI2 1143 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 CCAR1Q8IX12 1150 aaKnown RBP6.63□□□□□ -1.35
SMAD3-209ENST00000558894 SMC5Q8IY18 1101 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 GMCL1P1Q8NEA9 526 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 NEDD1Q8NHV4 660 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 MTMR4Q9NYA4 1195 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 ZMYND8Q9ULU4 1186 aaPredicted RBP6.63□□□□□ -1.35
SMAD3-209ENST00000558894 SYNPO2Q9UMS6 1093 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 IVNS1ABPQ9Y6Y0 642 aa6.63□□□□□ -1.35
SMAD3-209ENST00000558894 DNM1LO00429 736 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 ERC2O15083 957 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 SEPT4O43236 478 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 ADCY6O43306 1168 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 SLC25A27O95847 323 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 SNAI1O95863 264 aaPredicted RBP6.62□□□□□ -1.35
SMAD3-209ENST00000558894 IGHDP01880 384 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 FCER1AP12319 257 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 MAGEA10P43363 369 aaPredicted RBP6.62□□□□□ -1.35
SMAD3-209ENST00000558894 PDE1AP54750 535 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 PPARAQ07869 468 aa6.62□□□□□ -1.35
SMAD3-209ENST00000558894 PLS1Q14651 629 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms