RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 MYLIPQ8WY64 445 aa19.27■□□□□ 0.68
CDC42BPB-203ENST00000558867 MMP19Q99542 508 aa19.27■□□□□ 0.68
CDC42BPB-203ENST00000558867 VCPKMTQ9H867 229 aa19.27■□□□□ 0.68
CDC42BPB-203ENST00000558867 DCP1AQ9NPI6 582 aaPredicted RBP19.27■□□□□ 0.68
CDC42BPB-203ENST00000558867 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.68
CDC42BPB-203ENST00000558867 NAV1Q8NEY1 1877 aa19.26■□□□□ 0.67
CDC42BPB-203ENST00000558867 TRIM43BA6NCK2 446 aa19.26■□□□□ 0.67
CDC42BPB-203ENST00000558867 CLASRPQ8N2M8 674 aaKnown RBP19.26■□□□□ 0.67
CDC42BPB-203ENST00000558867 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
CDC42BPB-203ENST00000558867 TRIM43Q96BQ3 446 aaPredicted RBP19.26■□□□□ 0.67
CDC42BPB-203ENST00000558867 ATG4CQ96DT6 458 aa19.26■□□□□ 0.67
CDC42BPB-203ENST00000558867 TINF2Q9BSI4 451 aa19.26■□□□□ 0.67
CDC42BPB-203ENST00000558867 EXOC6BQ9Y2D4 811 aa19.26■□□□□ 0.67
CDC42BPB-203ENST00000558867 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 RLBP1P12271 317 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 SH3RF1Q7Z6J0 888 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 SPICE1Q8N0Z3 855 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 NUP133Q8WUM0 1156 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 SDR42E1Q8WUS8 393 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 ATP8A2Q9NTI2 1148 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 TMEM39AQ9NV64 488 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 CNPY2Q9Y2B0 182 aa19.25■□□□□ 0.67
CDC42BPB-203ENST00000558867 DCDC2CA8MYV0 355 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 KIAA0355O15063 1070 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 IFIT2P09913 472 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 AKR1A1P14550 325 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 FPGSQ05932 587 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 TMEM132BQ14DG7 1078 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 CEP85Q6P2H3 762 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 CCDC174Q6PII3 467 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 DNAJC2Q99543 621 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 TSEN34Q9BSV6 310 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 TTYH1Q9H313 450 aaPredicted RBP19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 GOPCQ9HD26 462 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 DDX19BQ9UMR2 479 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 COG6Q9Y2V7 657 aa19.24■□□□□ 0.67
CDC42BPB-203ENST00000558867 A0A0G2JMZ2 1700 aa19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 GOLIM4O00461 696 aa19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 PQBP1O60828 265 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 STAT3P40763 770 aa19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 CENPQQ7L2Z9 268 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 CHMP4BQ9H444 224 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 KANSL2Q9H9L4 492 aa19.23■□□□□ 0.67
CDC42BPB-203ENST00000558867 A0A1W2PQ45 241 aaPredicted RBP19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 A0A1W2PQY0 241 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 PGK1P00558 417 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 AKR1B1P15121 316 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 LCORLQ8N3X6 602 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 MSL3Q8N5Y2 521 aaKnown RBP19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 SLC44A5Q8NCS7 719 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 RHPN1Q8TCX5 695 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 TOX2Q96NM4 488 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 IL1RAPL2Q9NP60 686 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 PRDM6Q9NQX0 595 aa19.22■□□□□ 0.67
CDC42BPB-203ENST00000558867 RAD21O60216 631 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 KIAA1755Q5JYT7 1200 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 KIF1BPQ96EK5 621 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 DYNLL2Q96FJ2 89 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 ARMT1Q9H993 441 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 STARD7Q9NQZ5 370 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 ADAMTS5Q9UNA0 930 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 MYH8P13535 1937 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 MROH7Q68CQ1 1323 aa19.21■□□□□ 0.67
CDC42BPB-203ENST00000558867 ROBO3Q96MS0 1386 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 ZNFX1Q9P2E3 1918 aaKnown RBP19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 MOXD2PA6NHM9 499 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 HMMRO75330 724 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 PGK2P07205 417 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 CYP2D6P10635 497 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 CDK8P49336 464 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 ZNF792Q3KQV3 632 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 ANKRD33Q7Z3H0 272 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 SPC25Q9HBM1 224 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 FAM184BQ9ULE4 1060 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 PPP1R9AQ9ULJ8 1098 aa19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 CTDP1Q9Y5B0 961 aaPredicted RBP19.2■□□□□ 0.66
CDC42BPB-203ENST00000558867 TCRBV5S4A2TA0A5A2 114 aa19.19■□□□□ 0.66
CDC42BPB-203ENST00000558867 VWA5AO00534 786 aa19.19■□□□□ 0.66
CDC42BPB-203ENST00000558867 MBD4O95243 580 aa19.19■□□□□ 0.66
CDC42BPB-203ENST00000558867 EEF2P13639 858 aaKnown RBP19.19■□□□□ 0.66
CDC42BPB-203ENST00000558867 C12orf60Q5U649 245 aa19.19■□□□□ 0.66
CDC42BPB-203ENST00000558867 SIAH1Q8IUQ4 282 aa19.19■□□□□ 0.66
CDC42BPB-203ENST00000558867 DDX11Q96FC9 970 aa19.19■□□□□ 0.66
CDC42BPB-203ENST00000558867 VCANP13611 3396 aa19.19■□□□□ 0.66
CDC42BPB-203ENST00000558867 SMCHD1A6NHR9 2005 aa19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 ZNF865P0CJ78 1059 aaPredicted RBP19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 DNAJB2P25686 324 aa19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 ACLYP53396 1101 aa19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 TJAP1Q5JTD0 557 aa19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 ZSCAN25Q6NSZ9 544 aa19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 C16orf86Q6ZW13 317 aa19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 PCSK9Q8NBP7 692 aaKnown RBP19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 GLT1D1Q96MS3 346 aa19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 PAG1Q9NWQ8 432 aa19.18■□□□□ 0.66
CDC42BPB-203ENST00000558867 SYNGAP1Q96PV0 1343 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms