RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 SOX4Q06945 474 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-209ENST00000558861 MBTPS1Q14703 1052 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 ANKRD34AQ69YU3 496 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 Q6ZS46 218 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 C12orf50Q8NA57 414 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-209ENST00000558861 FANCD2OSQ96PS1 177 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 DISC1Q9NRI5 854 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 PCDHB14Q9Y5E9 798 aa8.33□□□□□ -1.08
LRRC28-209ENST00000558861 FMN2Q9NZ56 1722 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 ANKARQ7Z5J8 1434 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 C9orf172C9J069 976 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 ZNF165P49910 485 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 NRG1Q02297 640 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-209ENST00000558861 RING1Q06587 406 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 COL9A2Q14055 689 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-209ENST00000558861 DYMQ7RTS9 669 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 C2CD4AQ8NCU7 369 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-209ENST00000558861 WFDC12Q8WWY7 111 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 DRC1Q96MC2 740 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 HIRIP3Q9BW71 556 aaPredicted RBP8.32□□□□□ -1.08
LRRC28-209ENST00000558861 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 POGKQ9P215 609 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 ACTL7BQ9Y614 415 aa8.32□□□□□ -1.08
LRRC28-209ENST00000558861 EIF3AQ14152 1382 aaKnown RBP8.32□□□□□ -1.08
LRRC28-209ENST00000558861 QRICH2Q9H0J4 1663 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 KRBA1A5PL33 1030 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 TOM1O60784 492 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 HTR3BO95264 441 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 HCLS1P14317 486 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-209ENST00000558861 ATF3P18847 181 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 GRK4P32298 578 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 NTF4P34130 210 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 ADGRE1Q14246 886 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 ZBTB37Q5TC79 503 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 BRINP3Q76B58 766 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 REXO1Q8N1G1 1221 aaKnown RBP8.31□□□□□ -1.08
LRRC28-209ENST00000558861 DHX38Q92620 1227 aaKnown RBP8.31□□□□□ -1.08
LRRC28-209ENST00000558861 FERD3LQ96RJ6 166 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 FAM105AQ9NUU6 356 aa8.31□□□□□ -1.08
LRRC28-209ENST00000558861 RNF225M0QZC1 329 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-209ENST00000558861 NEFMP07197 916 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 HSPA5P11021 654 aaKnown RBP8.3□□□□□ -1.08
LRRC28-209ENST00000558861 ATP2B1P20020 1258 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 CHRNA4P43681 627 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
LRRC28-209ENST00000558861 TTLL4Q14679 1199 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 FBXW10Q5XX13 1052 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 ALYREFQ86V81 257 aaKnown RBP8.3□□□□□ -1.08
LRRC28-209ENST00000558861 DCAF5Q96JK2 942 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 UBL7Q96S82 380 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-209ENST00000558861 ORAI2Q96SN7 254 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 CDK19Q9BWU1 502 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 SRRTQ9BXP5 876 aaKnown RBP8.3□□□□□ -1.08
LRRC28-209ENST00000558861 ATXN3LQ9H3M9 355 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 STK17AQ9UEE5 414 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 ZNRF3Q9ULT6 936 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 MRVI1Q9Y6F6 885 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 DISP3Q9P2K9 1392 aa8.3□□□□□ -1.08
LRRC28-209ENST00000558861 SSBP05455 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
LRRC28-209ENST00000558861 GTF2F1P35269 517 aaKnown RBP eCLIP8.29□□□□□ -1.08
LRRC28-209ENST00000558861 UBE3DQ7Z6J8 389 aa8.29□□□□□ -1.08
LRRC28-209ENST00000558861 RNF214Q8ND24 703 aa8.29□□□□□ -1.08
LRRC28-209ENST00000558861 MEGF10Q96KG7 1140 aa8.29□□□□□ -1.08
LRRC28-209ENST00000558861 PUS7Q96PZ0 661 aaKnown RBP8.29□□□□□ -1.08
LRRC28-209ENST00000558861 CEP41Q9BYV8 373 aa8.29□□□□□ -1.08
LRRC28-209ENST00000558861 WNT10AQ9GZT5 417 aa8.29□□□□□ -1.08
LRRC28-209ENST00000558861 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-209ENST00000558861 EHMT1Q9H9B1 1298 aa8.29□□□□□ -1.08
LRRC28-209ENST00000558861 REV1Q9UBZ9 1251 aa8.29□□□□□ -1.08
LRRC28-209ENST00000558861 STRIP2Q9ULQ0 834 aa8.29□□□□□ -1.08
LRRC28-209ENST00000558861 AHDC1Q5TGY3 1603 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-209ENST00000558861 TOPAZ1Q8N9V7 1692 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 ROBO1Q9Y6N7 1651 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 SART1O43290 800 aaKnown RBP8.28□□□□□ -1.08
LRRC28-209ENST00000558861 GAS2O43903 313 aaKnown RBP8.28□□□□□ -1.08
LRRC28-209ENST00000558861 ATE1O95260 518 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 PGRP06401 933 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 PLCG1P19174 1290 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 ASPAP45381 313 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 CD163Q86VB7 1156 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 TXNRD3Q86VQ6 643 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 CPLX3Q8WVH0 158 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 SHDQ96IW2 340 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 ANTXR1Q9H6X2 564 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 ZNF408Q9H9D4 720 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 FBRSQ9HAH7 460 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 PIDD1Q9HB75 910 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 TACC3Q9Y6A5 838 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 EVC2Q86UK5 1308 aa8.28□□□□□ -1.08
LRRC28-209ENST00000558861 PXDNQ92626 1479 aa8.27□□□□□ -1.09
LRRC28-209ENST00000558861 CD163L1Q9NR16 1453 aa8.27□□□□□ -1.09
LRRC28-209ENST00000558861 POLR3AO14802 1390 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-209ENST00000558861 FANCGO15287 622 aa8.27□□□□□ -1.09
LRRC28-209ENST00000558861 DNAJA2O60884 412 aa8.27□□□□□ -1.09
LRRC28-209ENST00000558861 RAB6AP20340 208 aa8.27□□□□□ -1.09
LRRC28-209ENST00000558861 PDE4BQ07343 736 aa8.27□□□□□ -1.09
LRRC28-209ENST00000558861 UBXN4Q92575 508 aa8.27□□□□□ -1.09
LRRC28-209ENST00000558861 ISL2Q96A47 359 aa8.27□□□□□ -1.09
LRRC28-209ENST00000558861 FAM46AQ96IP4 442 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms