RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 GJB1P08034 283 aa12□□□□□ -0.49
SPG11-212ENST00000558790 PLA2G5P39877 138 aa12□□□□□ -0.49
SPG11-212ENST00000558790 RGS3P49796 1198 aa12□□□□□ -0.49
SPG11-212ENST00000558790 FCGRTP55899 365 aa12□□□□□ -0.49
SPG11-212ENST00000558790 PRRT2Q7Z6L0 340 aaPredicted RBP12□□□□□ -0.49
SPG11-212ENST00000558790 SCYL3Q8IZE3 742 aa12□□□□□ -0.49
SPG11-212ENST00000558790 RNF208Q9H0X6 261 aa12□□□□□ -0.49
SPG11-212ENST00000558790 FRMD4AQ9P2Q2 1039 aaPredicted RBP12□□□□□ -0.49
SPG11-212ENST00000558790 GAKO14976 1311 aa12□□□□□ -0.49
SPG11-212ENST00000558790 CXCL11O14625 94 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 CIAO1O76071 339 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 FARP2O94887 1054 aaPredicted RBP11.99□□□□□ -0.49
SPG11-212ENST00000558790 SLURP2P0DP57 97 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 PTPRAP18433 802 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 FSHRP23945 695 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 ADORA1P30542 326 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 MCCD1P59942 119 aaPredicted RBP11.99□□□□□ -0.49
SPG11-212ENST00000558790 NBPF20Q3BBV1 942 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 SLFNL1Q499Z3 407 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 GADL1Q6ZQY3 521 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 TBC1D9Q6ZT07 1266 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 ZNF592Q92610 1267 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 IDI2Q9BXS1 227 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 GNL3LQ9NVN8 582 aaKnown RBP11.99□□□□□ -0.49
SPG11-212ENST00000558790 BIN2Q9UBW5 565 aaPredicted RBP11.99□□□□□ -0.49
SPG11-212ENST00000558790 ZHX2Q9Y6X8 837 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 RPTORQ8N122 1335 aa11.99□□□□□ -0.49
SPG11-212ENST00000558790 E9PSI1 815 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 ENTPD3O75355 529 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 UBTFL1P0CB47 393 aaPredicted RBP11.98□□□□□ -0.49
SPG11-212ENST00000558790 ELNP15502 786 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 UBXN2AP68543 259 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 RASGRF1Q13972 1273 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 RNF135Q8IUD6 432 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
SPG11-212ENST00000558790 FAM161BQ96MY7 647 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 DDX4Q9NQI0 724 aaKnown RBP11.98□□□□□ -0.49
SPG11-212ENST00000558790 PICK1Q9NRD5 415 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 SMC4Q9NTJ3 1288 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 DENND2AQ9ULE3 1009 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 ZMYND8Q9ULU4 1186 aaPredicted RBP11.98□□□□□ -0.49
SPG11-212ENST00000558790 PA2G4Q9UQ80 394 aaKnown RBP11.98□□□□□ -0.49
SPG11-212ENST00000558790 MAP4K5Q9Y4K4 846 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 AFG3L2Q9Y4W6 797 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 MYH1P12882 1939 aa11.98□□□□□ -0.49
SPG11-212ENST00000558790 REV3LO60673 3130 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 DDTLA6NHG4 134 aaPredicted RBP11.97□□□□□ -0.49
SPG11-212ENST00000558790 ADCY3O60266 1144 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 INHAP05111 366 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 BMP8BP34820 402 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 FLT3LGP49771 235 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 PICALMQ13492 652 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 LRIT3Q3SXY7 679 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 TSGA10IPQ3SY00 556 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 CCDC102BQ68D86 513 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 FASTKD5Q7L8L6 764 aaKnown RBP11.97□□□□□ -0.49
SPG11-212ENST00000558790 CCDC84Q86UT8 332 aaPredicted RBP11.97□□□□□ -0.49
SPG11-212ENST00000558790 DZIP1Q86YF9 867 aaKnown RBP11.97□□□□□ -0.49
SPG11-212ENST00000558790 ZSCAN29Q8IWY8 852 aaPredicted RBP11.97□□□□□ -0.49
SPG11-212ENST00000558790 PPP1R12CQ9BZL4 782 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
SPG11-212ENST00000558790 CDV3Q9UKY7 258 aaKnown RBP11.97□□□□□ -0.49
SPG11-212ENST00000558790 SLC45A1Q9Y2W3 748 aa11.97□□□□□ -0.49
SPG11-212ENST00000558790 LRRFIP2Q9Y608 721 aaKnown RBP11.97□□□□□ -0.49
SPG11-212ENST00000558790 COL2A1P02458 1487 aaPredicted RBP11.96□□□□□ -0.49
SPG11-212ENST00000558790 MROH7-TTC4A0A0A0MT08 1334 aa11.96□□□□□ -0.49
SPG11-212ENST00000558790 PDS5AQ29RF7 1337 aaKnown RBP11.96□□□□□ -0.49
SPG11-212ENST00000558790 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
SPG11-212ENST00000558790 TRIM75PA6NK02 468 aa11.96□□□□□ -0.49
SPG11-212ENST00000558790 ESPNB1AK53 854 aa11.96□□□□□ -0.49
SPG11-212ENST00000558790 TNPO2O14787 897 aaKnown RBP11.96□□□□□ -0.49
SPG11-212ENST00000558790 SKIP12755 728 aa11.96□□□□□ -0.49
SPG11-212ENST00000558790 IL15P40933 162 aaPredicted RBP11.96□□□□□ -0.49
SPG11-212ENST00000558790 GRM5P41594 1212 aa11.96□□□□□ -0.49
SPG11-212ENST00000558790 BTDP43251 543 aa11.96□□□□□ -0.49
SPG11-212ENST00000558790 ALDH1L2Q3SY69 923 aa11.96□□□□□ -0.49
SPG11-212ENST00000558790 INTS6LQ5JSJ4 861 aaKnown RBP11.96□□□□□ -0.49
SPG11-212ENST00000558790 PHTF2Q8N3S3 785 aa11.96□□□□□ -0.49
SPG11-212ENST00000558790 ZGPATQ8N5A5 531 aaKnown RBP11.96□□□□□ -0.49
SPG11-212ENST00000558790 SMCR8Q8TEV9 937 aaPredicted RBP11.96□□□□□ -0.49
SPG11-212ENST00000558790 NCOR1O75376 2440 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 TTC24A2A3L6 582 aaPredicted RBP11.95□□□□□ -0.5
SPG11-212ENST00000558790 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 J3QL48 77 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 SGPL1O95470 568 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 ADH1CP00326 375 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 SYN1P17600 705 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 MAP3K10Q02779 954 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 SLFN5Q08AF3 891 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 TREML2Q5T2D2 321 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 C7orf61Q8IZ16 206 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 CYP4X1Q8N118 509 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 ANKRD13CQ8N6S4 541 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 SNIP1Q8TAD8 396 aaKnown RBP11.95□□□□□ -0.5
SPG11-212ENST00000558790 ZNF384Q8TF68 577 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 PAK6Q9NQU5 681 aaPredicted RBP11.95□□□□□ -0.5
SPG11-212ENST00000558790 ABCF2Q9UG63 623 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 AGTPBP1Q9UPW5 1226 aa11.95□□□□□ -0.5
SPG11-212ENST00000558790 CTNND1O60716 968 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms