RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SUGT1Q9Y2Z0 365 aa8.64□□□□□ -1.03
SPG11-204ENST00000557866 VPS37CA5D8V6 355 aaPredicted RBP8.63□□□□□ -1.03
SPG11-204ENST00000557866 C21orf2O43822 256 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 ORC4O43929 436 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 PRPF40AO75400 957 aaKnown RBP8.63□□□□□ -1.03
SPG11-204ENST00000557866 PRDM1O75626 825 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 WFS1O76024 890 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 BAG3O95817 575 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 BMP1P13497 986 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 TIMP2P16035 220 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 RXRAP19793 462 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 CDC27P30260 824 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 ADD1P35611 737 aaKnown RBP8.63□□□□□ -1.03
SPG11-204ENST00000557866 USP5P45974 858 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 SEC23AQ15436 765 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 C12orf60Q5U649 245 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 CC2D2BQ6DHV5 1058 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 PDXDC2PQ6P474 469 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 APOA5Q6Q788 366 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 MAPKAPK5Q8IW41 473 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 TRMT44Q8IYL2 757 aaKnown RBP8.63□□□□□ -1.03
SPG11-204ENST00000557866 TGFBRAP1Q8WUH2 860 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 LRRN4Q8WUT4 740 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 MTA3Q9BTC8 594 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 MYL10Q9BUA6 226 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 KLF16Q9BXK1 252 aaPredicted RBP8.63□□□□□ -1.03
SPG11-204ENST00000557866 GOPCQ9HD26 462 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 TOMM22Q9NS69 142 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 FKBPLQ9UIM3 349 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 DAGLAQ9Y4D2 1042 aa8.63□□□□□ -1.03
SPG11-204ENST00000557866 LAMA4Q16363 1823 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 SLX4Q8IY92 1834 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 F8W031 263 aaPredicted RBP8.62□□□□□ -1.03
SPG11-204ENST00000557866 AP1G2O75843 785 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 PCP11498 1178 aaKnown RBP8.62□□□□□ -1.03
SPG11-204ENST00000557866 PDCP20941 246 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 METAP2P50579 478 aaKnown RBP eCLIP8.62□□□□□ -1.03
SPG11-204ENST00000557866 PLCD1P51178 756 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 HMGN5P82970 282 aaKnown RBP8.62□□□□□ -1.03
SPG11-204ENST00000557866 KIAA2012Q0VF49 1180 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 RESTQ13127 1097 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 NTRK3Q16288 839 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 AOC3Q16853 763 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 SLC4A8Q2Y0W8 1093 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 DACT2Q5SW24 774 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
SPG11-204ENST00000557866 PODNQ7Z5L7 613 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 TEX11Q8IYF3 940 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 TTLL6Q8N841 843 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 GPT2Q8TD30 523 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 ESR2Q92731 530 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 DYNLL2Q96FJ2 89 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 GDPD2Q9HCC8 539 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 MCM9Q9NXL9 1143 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 ARPP21Q9UBL0 812 aaPredicted RBP8.62□□□□□ -1.03
SPG11-204ENST00000557866 SAP30BPQ9UHR5 308 aaKnown RBP8.62□□□□□ -1.03
SPG11-204ENST00000557866 TTF2Q9UNY4 1162 aaKnown RBP8.62□□□□□ -1.03
SPG11-204ENST00000557866 CNPY2Q9Y2B0 182 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 MAP4K5Q9Y4K4 846 aa8.62□□□□□ -1.03
SPG11-204ENST00000557866 NID2Q14112 1375 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 ZC3H4Q9UPT8 1303 aaKnown RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 GOLGA8AA7E2F4 631 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 YDJCA8MPS7 323 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 GOLGA6L22H0YM25 854 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 ZBTB43O43298 467 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 ECE2O60344 883 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 RANBP6O60518 1105 aaKnown RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 PTMSP20962 102 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 SCNN1DP51172 638 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 FKBP1AP62942 108 aaKnown RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 DNM1Q05193 864 aaKnown RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 WTAPQ15007 396 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 FAM47AQ5JRC9 791 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 STRIP1Q5VSL9 837 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 APOBEC3HQ6NTF7 200 aaKnown RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 MRPL14Q6P1L8 145 aaKnown RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 FAM173BQ6P4H8 233 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 NFXL1Q6ZNB6 911 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 USP48Q86UV5 1035 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 FERMT3Q86UX7 667 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 MICU3Q86XE3 530 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 CCDC144CPQ8IYA2 1237 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 ENAHQ8N8S7 591 aaPredicted RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 FAM184AQ8NB25 1140 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 TMEM87AQ8NBN3 555 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 SLC44A5Q8NCS7 719 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 ZSCAN10Q96SZ4 725 aaPredicted RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 NOL10Q9BSC4 688 aaKnown RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 ORC3Q9UBD5 711 aaPredicted RBP8.61□□□□□ -1.03
SPG11-204ENST00000557866 PCDHAC2Q9Y5I4 1007 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 SLC12A7Q9Y666 1083 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 MAST2Q6P0Q8 1798 aa8.61□□□□□ -1.03
SPG11-204ENST00000557866 TNKSO95271 1327 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 FLT1P17948 1338 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 CCDC69A6NI79 296 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 TERTO14746 1132 aaKnown RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 NMT2O60551 498 aa8.6□□□□□ -1.03
SPG11-204ENST00000557866 GADD45BO75293 160 aaPredicted RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 WDHD1O75717 1129 aaPredicted RBP8.6□□□□□ -1.03
SPG11-204ENST00000557866 ZIC2O95409 532 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms