RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FBXL16Q8N461 479 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 ENAHQ8N8S7 591 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-234ENST00000557703 MAP3K14Q99558 947 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 P2RX7Q99572 595 aaKnown RBP16.06■□□□□ 0.16
SHMT2-234ENST00000557703 TANGO6Q9C0B7 1094 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 PNMA2Q9UL42 364 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 ADAMTS5Q9UNA0 930 aa16.06■□□□□ 0.16
SHMT2-234ENST00000557703 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
SHMT2-234ENST00000557703 NMT2O60551 498 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 FLOT1O75955 427 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 SNHG28P0DPA3 235 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 CYP2C8P10632 490 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 DSG3P32926 999 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 COPB2P35606 906 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 LBX1P52954 281 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 PRMT2P55345 433 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 SEC23AQ15436 765 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 DHX32Q7L7V1 743 aaKnown RBP16.05■□□□□ 0.16
SHMT2-234ENST00000557703 GPRC5AQ8NFJ5 357 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 TM6SF1Q9BZW5 370 aa16.05■□□□□ 0.16
SHMT2-234ENST00000557703 HOXD10P28358 340 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 STAT2P52630 851 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 WTAPQ15007 396 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 STOX1Q6ZVD7 989 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 SPICE1Q8N0Z3 855 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 PNMA1Q8ND90 353 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 IGDCC4Q8TDY8 1250 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 ZNF296Q8WUU4 475 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-234ENST00000557703 IL17RAQ96F46 866 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 SLF1Q9BQI6 1058 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 PPP1R9AQ9ULJ8 1098 aa16.04■□□□□ 0.16
SHMT2-234ENST00000557703 SPDYE16A6NNV3 312 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-234ENST00000557703 ATP2A1O14983 1001 aa16.03■□□□□ 0.16
SHMT2-234ENST00000557703 OAZ1P54368 228 aa16.03■□□□□ 0.16
SHMT2-234ENST00000557703 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
SHMT2-234ENST00000557703 ASPRV1Q53RT3 343 aa16.03■□□□□ 0.16
SHMT2-234ENST00000557703 KIAA1755Q5JYT7 1200 aa16.03■□□□□ 0.16
SHMT2-234ENST00000557703 FAM83BQ5T0W9 1011 aa16.03■□□□□ 0.16
SHMT2-234ENST00000557703 BTNL9Q6UXG8 535 aa16.03■□□□□ 0.16
SHMT2-234ENST00000557703 CYB5R4Q7L1T6 521 aa16.03■□□□□ 0.16
SHMT2-234ENST00000557703 LRRC47Q8N1G4 583 aaKnown RBP16.03■□□□□ 0.16
SHMT2-234ENST00000557703 PRC1O43663 620 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 RAD21O60216 631 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 CALM1P0DP23 149 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 CALM2P0DP24 149 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 CALM3P0DP25 149 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 PDHBP11177 359 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 MAPK4P31152 587 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 RCAN1P53805 252 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 EXOSC10Q01780 885 aaKnown RBP16.02■□□□□ 0.16
SHMT2-234ENST00000557703 TMEM67Q5HYA8 995 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 CATIPQ7Z7H3 387 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 RASEFQ8IZ41 740 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 R3HDMLQ9H3Y0 253 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 RBPJLQ9UBG7 517 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 CPA4Q9UI42 421 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 SNX14Q9Y5W7 946 aa16.02■□□□□ 0.16
SHMT2-234ENST00000557703 VWA5AO00534 786 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 ZBED4O75132 1171 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 SLC25A27O95847 323 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 FCGRTP55899 365 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 ERVK-9P63128 1117 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 ERVK-24P63145 666 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 ZNF543Q08ER8 600 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 DGKZQ13574 1117 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 BLOC1S2Q6QNY1 142 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 CTU1Q7Z7A3 348 aaKnown RBP16.01■□□□□ 0.15
SHMT2-234ENST00000557703 SGMS1Q86VZ5 419 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 ANKRD13CQ8N6S4 541 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 SHCBP1Q8NEM2 672 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 ZKSCAN3Q9BRR0 538 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 MAF1Q9H063 256 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 TAF6LQ9Y6J9 622 aa16.01■□□□□ 0.15
SHMT2-234ENST00000557703 TMEM232C9JQI7 657 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 STRNO43815 780 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 DDAH1O94760 285 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 SMARCA1P28370 1054 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 KIF5BP33176 963 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 ANTXR2P58335 489 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 TRAF1Q13077 416 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 C8orf34Q49A92 452 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 CCAR1Q8IX12 1150 aaKnown RBP16■□□□□ 0.15
SHMT2-234ENST00000557703 UPF2Q9HAU5 1272 aaKnown RBP16■□□□□ 0.15
SHMT2-234ENST00000557703 TSKSQ9UJT2 592 aa16■□□□□ 0.15
SHMT2-234ENST00000557703 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
SHMT2-234ENST00000557703 CASP8AP2Q9UKL3 1982 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 CCDC69A6NI79 296 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 SH2B2O14492 632 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-234ENST00000557703 PARP1P09874 1014 aaKnown RBP15.99■□□□□ 0.15
SHMT2-234ENST00000557703 GNAQP50148 359 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 SYNE3Q6ZMZ3 975 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 COA7Q96BR5 231 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 JAKMIP1Q96N16 626 aaKnown RBP15.99■□□□□ 0.15
SHMT2-234ENST00000557703 LZTS2Q9BRK4 669 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 SPATC1LQ9H0A9 340 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 MROH8Q9H579 483 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 EFCC1Q9HA90 598 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 LY9Q9HBG7 655 aa15.99■□□□□ 0.15
SHMT2-234ENST00000557703 SLC38A10Q9HBR0 1119 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms