RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 RPUSD2Q8IZ73 545 aaKnown RBP16.43■□□□□ 0.22
TMEM260-215ENST00000557626 ZGPATQ8N5A5 531 aaKnown RBP16.43■□□□□ 0.22
TMEM260-215ENST00000557626 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
TMEM260-215ENST00000557626 IRF2BPLQ9H1B7 796 aa16.43■□□□□ 0.22
TMEM260-215ENST00000557626 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
TMEM260-215ENST00000557626 UMODL1Q5DID0 1318 aa16.43■□□□□ 0.22
TMEM260-215ENST00000557626 SPDYE16A6NNV3 312 aaPredicted RBP16.42■□□□□ 0.22
TMEM260-215ENST00000557626 ARHGEF15O94989 841 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 GDF11O95390 407 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 RHBDL3P58872 404 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 SHROOM1Q2M3G4 852 aaPredicted RBP16.42■□□□□ 0.22
TMEM260-215ENST00000557626 KLHDC9Q8NEP7 349 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 GDPD5Q8WTR4 605 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 FAM163AQ96GL9 167 aaPredicted RBP16.42■□□□□ 0.22
TMEM260-215ENST00000557626 C12orf42Q96LP6 360 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 FEZ1Q99689 392 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 GNL3LQ9NVN8 582 aaKnown RBP16.42■□□□□ 0.22
TMEM260-215ENST00000557626 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
TMEM260-215ENST00000557626 GVINP1Q7Z2Y8 2422 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 ZNFX1Q9P2E3 1918 aaKnown RBP16.42■□□□□ 0.22
TMEM260-215ENST00000557626 SIPA1L1O43166 1804 aa16.42■□□□□ 0.22
TMEM260-215ENST00000557626 DNAH14Q0VDD8 3507 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 MED19A0JLT2 244 aaPredicted RBP16.41■□□□□ 0.22
TMEM260-215ENST00000557626 SOWAHBA6NEL2 793 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 TAL1P17542 331 aaPredicted RBP16.41■□□□□ 0.22
TMEM260-215ENST00000557626 ERCC3P19447 782 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 BEND3Q5T5X7 828 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 CCSAPQ6IQ19 270 aaPredicted RBP16.41■□□□□ 0.22
TMEM260-215ENST00000557626 BMP8AQ7Z5Y6 402 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 PBXIP1Q96AQ6 731 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 GINM1Q9NU53 330 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 PRKAG3Q9UGI9 489 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 DENND2AQ9ULE3 1009 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 ZBTB21Q9ULJ3 1066 aa16.41■□□□□ 0.22
TMEM260-215ENST00000557626 ACACBO00763 2458 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 CD4P01730 458 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 ASCL5Q7RTU5 278 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 SHCBP1Q8NEM2 672 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 LPIN2Q92539 896 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 PI4KBQ9UBF8 816 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 MUTYHQ9UIF7 546 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 FAM50BQ9Y247 325 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
TMEM260-215ENST00000557626 CACNA1FO60840 1977 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 C19orf67A6NJJ6 358 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 ASGR1P07306 291 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 VCAM1P19320 739 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 HERC4Q5GLZ8 1057 aaPredicted RBP16.39■□□□□ 0.21
TMEM260-215ENST00000557626 ADHFE1Q8IWW8 467 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 ABRAQ8N0Z2 381 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 PCSK9Q8NBP7 692 aaKnown RBP16.39■□□□□ 0.21
TMEM260-215ENST00000557626 SUCLG2Q96I99 432 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 SLC9A7Q96T83 725 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 TRIM34Q9BYJ4 488 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 SPATC1LQ9H0A9 340 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
TMEM260-215ENST00000557626 GPR75-ASB3A0A0A6YYF3 556 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 MYADML2A6NDP7 307 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 PROB1E7EW31 1015 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 ZNF865P0CJ78 1059 aaPredicted RBP16.38■□□□□ 0.21
TMEM260-215ENST00000557626 IRS1P35568 1242 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 SPRED2Q7Z698 418 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 CNTNAP3BQ96NU0 1288 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 TINF2Q9BSI4 451 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 CNTNAP3Q9BZ76 1288 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 WNT8AQ9H1J5 351 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 ABCF2Q9UG63 623 aa16.38■□□□□ 0.21
TMEM260-215ENST00000557626 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 PRR23AA6NEV1 266 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 TMEM221A6NGB7 291 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 F6X3S4 739 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 H3BQ06 376 aaPredicted RBP16.37■□□□□ 0.21
TMEM260-215ENST00000557626 M0R296 226 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 SEMA3EO15041 775 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 CST5P28325 142 aaPredicted RBP16.37■□□□□ 0.21
TMEM260-215ENST00000557626 USP14P54578 494 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 EDAQ92838 391 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 CDCA7LQ96GN5 454 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 MROH8Q9H579 483 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 CNPY2Q9Y2B0 182 aa16.37■□□□□ 0.21
TMEM260-215ENST00000557626 MAP4K4O95819 1239 aaPredicted RBP16.36■□□□□ 0.21
TMEM260-215ENST00000557626 PFKMP08237 780 aa16.36■□□□□ 0.21
TMEM260-215ENST00000557626 C6orf222P0C671 652 aaPredicted RBP16.36■□□□□ 0.21
TMEM260-215ENST00000557626 NCAPG2Q86XI2 1143 aa16.36■□□□□ 0.21
TMEM260-215ENST00000557626 CRACR2BQ8N4Y2 399 aaPredicted RBP16.36■□□□□ 0.21
TMEM260-215ENST00000557626 NEK9Q8TD19 979 aa16.36■□□□□ 0.21
TMEM260-215ENST00000557626 SCLYQ96I15 445 aa16.36■□□□□ 0.21
TMEM260-215ENST00000557626 NOC4LQ9BVI4 516 aaKnown RBP16.36■□□□□ 0.21
TMEM260-215ENST00000557626 RPAP3Q9H6T3 665 aaPredicted RBP16.36■□□□□ 0.21
TMEM260-215ENST00000557626 DNAJC18Q9H819 358 aa16.36■□□□□ 0.21
TMEM260-215ENST00000557626 ZNF292O60281 2723 aa16.35■□□□□ 0.21
TMEM260-215ENST00000557626 FCER1AP12319 257 aa16.35■□□□□ 0.21
TMEM260-215ENST00000557626 MAPK8IP2Q13387 824 aaPredicted RBP16.35■□□□□ 0.21
TMEM260-215ENST00000557626 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
TMEM260-215ENST00000557626 SPTY2D1Q68D10 685 aaPredicted RBP16.35■□□□□ 0.21
TMEM260-215ENST00000557626 FBXL6Q8N531 539 aa16.35■□□□□ 0.21
TMEM260-215ENST00000557626 KLHDC4Q8TBB5 520 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms