RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 HOXC6P09630 235 aa12.69□□□□□ -0.38
PSMC6-215ENST00000557517 GNAT2P19087 354 aa12.69□□□□□ -0.38
PSMC6-215ENST00000557517 TRIM32Q13049 653 aa12.69□□□□□ -0.38
PSMC6-215ENST00000557517 AAMPQ13685 434 aa12.69□□□□□ -0.38
PSMC6-215ENST00000557517 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
PSMC6-215ENST00000557517 CCAR1Q8IX12 1150 aaKnown RBP12.69□□□□□ -0.38
PSMC6-215ENST00000557517 OTUD7AQ8TE49 926 aaPredicted RBP12.69□□□□□ -0.38
PSMC6-215ENST00000557517 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.69□□□□□ -0.38
PSMC6-215ENST00000557517 VCPKMTQ9H867 229 aa12.69□□□□□ -0.38
PSMC6-215ENST00000557517 ADAMTS5Q9UNA0 930 aa12.69□□□□□ -0.38
PSMC6-215ENST00000557517 ALPK3Q96L96 1907 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 MGAMO43451 1857 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 SLC15A5A6NIM6 579 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 STRNO43815 780 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 FARP2O94887 1054 aaPredicted RBP12.68□□□□□ -0.38
PSMC6-215ENST00000557517 EEF2P13639 858 aaKnown RBP12.68□□□□□ -0.38
PSMC6-215ENST00000557517 PTPREP23469 700 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 RGS2P41220 211 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 ICA1Q05084 483 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 MAP2K5Q13163 448 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 ANKLE1Q8NAG6 615 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 CRBNQ96SW2 442 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 STAP2Q9UGK3 403 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 LOC285556D6RIA3 1793 aa12.68□□□□□ -0.38
PSMC6-215ENST00000557517 GPAA1O43292 621 aa12.67□□□□□ -0.38
PSMC6-215ENST00000557517 MX1P20591 662 aa12.67□□□□□ -0.38
PSMC6-215ENST00000557517 RASA1P20936 1047 aa12.67□□□□□ -0.38
PSMC6-215ENST00000557517 ANKRD45Q5TZF3 282 aa12.67□□□□□ -0.38
PSMC6-215ENST00000557517 IFNL3Q8IZI9 196 aa12.67□□□□□ -0.38
PSMC6-215ENST00000557517 MB21D1Q8N884 522 aa12.67□□□□□ -0.38
PSMC6-215ENST00000557517 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
PSMC6-215ENST00000557517 MYO5AQ9Y4I1 1855 aaKnown RBP12.66□□□□□ -0.38
PSMC6-215ENST00000557517 M0R2C6 588 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 WDR46O15213 610 aaKnown RBP12.66□□□□□ -0.38
PSMC6-215ENST00000557517 CACNB2Q08289 660 aaPredicted RBP12.66□□□□□ -0.38
PSMC6-215ENST00000557517 GRB14Q14449 540 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 CCL14Q16627 93 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 TICAM2Q86XR7 235 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 CLEC10AQ8IUN9 316 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 SPICE1Q8N0Z3 855 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 SHCBP1Q8NEM2 672 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 MKL1Q969V6 931 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 MARVELD3Q96A59 401 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 PAWRQ96IZ0 340 aaKnown RBP12.66□□□□□ -0.38
PSMC6-215ENST00000557517 SEC62Q99442 399 aaKnown RBP12.66□□□□□ -0.38
PSMC6-215ENST00000557517 APBA2Q99767 749 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 MOV10L1Q9BXT6 1211 aaKnown RBP12.66□□□□□ -0.38
PSMC6-215ENST00000557517 SPATC1LQ9H0A9 340 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 EPB41L4AQ9HCS5 686 aaPredicted RBP12.66□□□□□ -0.38
PSMC6-215ENST00000557517 NYAP2Q9P242 653 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 FOCADQ5VW36 1801 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 PTPRFP10586 1907 aa12.66□□□□□ -0.38
PSMC6-215ENST00000557517 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.38
PSMC6-215ENST00000557517 ZKSCAN1P17029 563 aaPredicted RBP12.65□□□□□ -0.38
PSMC6-215ENST00000557517 GPR153Q6NV75 609 aa12.65□□□□□ -0.38
PSMC6-215ENST00000557517 NECAB2Q7Z6G3 386 aa12.65□□□□□ -0.38
PSMC6-215ENST00000557517 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
PSMC6-215ENST00000557517 MROH8Q9H579 483 aa12.65□□□□□ -0.38
PSMC6-215ENST00000557517 MKNK2Q9HBH9 465 aa12.65□□□□□ -0.38
PSMC6-215ENST00000557517 ZNF287Q9HBT7 754 aa12.65□□□□□ -0.38
PSMC6-215ENST00000557517 IGKV6D-41A0A0C4DH26 115 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 F5H6K3 240 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 FLOT1O75955 427 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 APPP05067 770 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 ERCC3P19447 782 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 PDE1AP54750 535 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 KLRC3Q07444 240 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 ZNF444Q8N0Y2 327 aaPredicted RBP12.64□□□□□ -0.39
PSMC6-215ENST00000557517 ABRAQ8N0Z2 381 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 EVI5LQ96CN4 794 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 NACAP1Q9BZK3 213 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 FLRT1Q9NZU1 646 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 SYNPO2Q9UMS6 1093 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 DDX60LQ5H9U9 1706 aaKnown RBP12.64□□□□□ -0.39
PSMC6-215ENST00000557517 ROBO3Q96MS0 1386 aa12.64□□□□□ -0.39
PSMC6-215ENST00000557517 DOCK3Q8IZD9 2030 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 FOXP2O15409 715 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 EVI5O60447 810 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 TDO2P48775 406 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 TMEM132BQ14DG7 1078 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 NPLOC4Q8TAT6 608 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 ATG4CQ96DT6 458 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 FSD1Q9BTV5 496 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 GOPCQ9HD26 462 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 CDK5RAP2Q96SN8 1893 aa12.63□□□□□ -0.39
PSMC6-215ENST00000557517 TTC28Q96AY4 2481 aa12.62□□□□□ -0.39
PSMC6-215ENST00000557517 VWA5AO00534 786 aa12.62□□□□□ -0.39
PSMC6-215ENST00000557517 COBLO75128 1261 aa12.62□□□□□ -0.39
PSMC6-215ENST00000557517 SLC25A27O95847 323 aa12.62□□□□□ -0.39
PSMC6-215ENST00000557517 COL6A1P12109 1028 aa12.62□□□□□ -0.39
PSMC6-215ENST00000557517 ADORA2AP29274 412 aa12.62□□□□□ -0.39
PSMC6-215ENST00000557517 CCND3P30281 292 aaPredicted RBP12.62□□□□□ -0.39
PSMC6-215ENST00000557517 BMP8BP34820 402 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms