RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 HSP90AA2PQ14568 343 aaPredicted RBP10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 TPD52L1Q16890 204 aaPredicted RBP10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 FAM182BQ5T319 152 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 NYAP1Q6ZVC0 841 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 TMC6Q7Z403 805 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 FCHSD1Q86WN1 690 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 VSTM4Q8IW00 320 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 CCAR2Q8N163 923 aaKnown RBP10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 ZNF713Q8N859 430 aaPredicted RBP10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 IQUBQ8NA54 791 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 TBC1D16Q8TBP0 767 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 CCDC12Q8WUD4 166 aaPredicted RBP10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 TGFBRAP1Q8WUH2 860 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 COA1Q9GZY4 146 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 MAD2L2Q9UI95 211 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 TAOK2Q9UL54 1235 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 ANKRD31Q8N7Z5 1873 aa10.18□□□□□ -0.78
PPP4R3A-212ENST00000557382 MYO3BQ8WXR4 1341 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 M0R2N6 131 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 CTIFO43310 598 aaKnown RBP10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 MYL1P05976 194 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 ATP2B1P20020 1258 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 BMP6P22004 513 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 PRPHP41219 470 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 CDK8P49336 464 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 DIXDC1Q155Q3 683 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 PTPN14Q15678 1187 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 ZNF174Q15697 407 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 EARS2Q5JPH6 523 aaKnown RBP10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 SPECC1Q5M775 1068 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 TEX11Q8IYF3 940 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 SYMPKQ92797 1274 aaKnown RBP10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 PAGE5Q96GU1 130 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 GTPBP4Q9BZE4 634 aaKnown RBP10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 BARHL2Q9NY43 387 aa10.17□□□□□ -0.78
PPP4R3A-212ENST00000557382 SNED1Q8TER0 1413 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 CCDC194A0A1B0GVG4 234 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 ESYT2A0FGR8 921 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 FAM205CA6NFA0 338 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 FOXN1O15353 648 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 GTPBP6O43824 516 aaPredicted RBP10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 PRR29P0C7W0 189 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 TOP1P11387 765 aaKnown RBP10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 TXLNAP40222 546 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 RHBDL3P58872 404 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 DDR1Q08345 913 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 DPYDQ12882 1025 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 E2F4Q16254 413 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 GRIK5Q16478 980 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 CFAP100Q494V2 611 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 PPP4R3BQ5MIZ7 849 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 MFSD14BQ5SR56 506 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 SPATA1Q5VX52 437 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 CEP135Q66GS9 1140 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 ISM2Q6H9L7 571 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 ARMCX5Q6P1M9 558 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 PIK3AP1Q6ZUJ8 805 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 NLGN1Q8N2Q7 840 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 C4orf32Q8N8J7 132 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 FLAD1Q8NFF5 587 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 DHX58Q96C10 678 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 DYNLL2Q96FJ2 89 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 EYA3Q99504 573 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 TMEM47Q9BQJ4 181 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 TMX1Q9H3N1 280 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 QTRT2Q9H974 415 aaKnown RBP10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 MAGEF1Q9HAY2 307 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 FANCLQ9NW38 375 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 RMND1Q9NWS8 449 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 ATP6V0A2Q9Y487 856 aa10.16□□□□□ -0.78
PPP4R3A-212ENST00000557382 FLT1P17948 1338 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 hCG_1642624A0A1W2PR95 340 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 PPEF1O14829 653 aaPredicted RBP10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 PARP1P09874 1014 aaKnown RBP10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 ATP1A3P13637 1013 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 NPR1P16066 1061 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 ALDH1B1P30837 517 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 TBX2Q13207 712 aaPredicted RBP10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 ARID5BQ14865 1188 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 USP49Q70CQ1 688 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 KRT27Q7Z3Y8 459 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 KRT25Q7Z3Z0 450 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 MAPKAPK5Q8IW41 473 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 PDILTQ8N807 584 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 EPSTI1Q96J88 318 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 C16orf45Q96MC5 204 aaPredicted RBP10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 CTAGE1Q96RT6 745 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 CCSER1Q9C0I3 900 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 ZMYND12Q9H0C1 365 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 CUEDC2Q9H467 287 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 POLLQ9UGP5 575 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 JAG2Q9Y219 1238 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 NFE2L3Q9Y4A8 694 aa10.15□□□□□ -0.78
PPP4R3A-212ENST00000557382 A0A087X0B3 334 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 VWA3AA6NCI4 1184 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 USP17L3A6NCW0 530 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 USP17L4A6NCW7 530 aa10.14□□□□□ -0.79
PPP4R3A-212ENST00000557382 KLRF2D3W0D1 207 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms