RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 SLC25A27O95847 323 aa16.31■□□□□ 0.2
VPS33B-206ENST00000557358 NDUFB10O96000 172 aa16.31■□□□□ 0.2
VPS33B-206ENST00000557358 MYCP01106 439 aaPredicted RBP16.31■□□□□ 0.2
VPS33B-206ENST00000557358 GSPT1P15170 499 aaKnown RBP16.31■□□□□ 0.2
VPS33B-206ENST00000557358 IKQ13123 557 aaPredicted RBP16.31■□□□□ 0.2
VPS33B-206ENST00000557358 Q3C1V9 767 aa16.31■□□□□ 0.2
VPS33B-206ENST00000557358 GPR142Q7Z601 462 aa16.31■□□□□ 0.2
VPS33B-206ENST00000557358 GMCL1P1Q8NEA9 526 aa16.31■□□□□ 0.2
VPS33B-206ENST00000557358 ESR2Q92731 530 aa16.31■□□□□ 0.2
VPS33B-206ENST00000557358 SLF1Q9BQI6 1058 aa16.31■□□□□ 0.2
VPS33B-206ENST00000557358 GREB1LQ9C091 1923 aaPredicted RBP16.31■□□□□ 0.2
VPS33B-206ENST00000557358 STRNO43815 780 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
VPS33B-206ENST00000557358 CAPN2P17655 700 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 CYP2B6P20813 491 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 SLFN13Q68D06 897 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 CASC1Q6TDU7 716 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 KIAA1211Q6ZU35 1233 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 LRRC47Q8N1G4 583 aaKnown RBP16.3■□□□□ 0.2
VPS33B-206ENST00000557358 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
VPS33B-206ENST00000557358 SHCBP1Q8NEM2 672 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 STAG1Q8WVM7 1258 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 SPATC1LQ9H0A9 340 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 RNF208Q9H0X6 261 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 MROH8Q9H579 483 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 PPP1R9AQ9ULJ8 1098 aa16.3■□□□□ 0.2
VPS33B-206ENST00000557358 SLC15A5A6NIM6 579 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 ZBED4O75132 1171 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 HMGCRP04035 888 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 FGRP09769 529 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 FDX1P10109 184 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 BMP3P12645 472 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 ELNP15502 786 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 ZKSCAN1P17029 563 aaPredicted RBP16.29■□□□□ 0.2
VPS33B-206ENST00000557358 CHMLP26374 656 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 SLC1A4P43007 532 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 TRDNQ13061 729 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 NCAPG2Q86XI2 1143 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 CHURC1Q8WUH1 139 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 ATG4CQ96DT6 458 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 APBA2Q99767 749 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 KRT23Q9C075 422 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 PORCNQ9H237 461 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 CNNM2Q9H8M5 875 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 BTBD7Q9P203 1132 aa16.29■□□□□ 0.2
VPS33B-206ENST00000557358 CNMDO75829 334 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 INHAP05111 366 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 MAP2K5Q13163 448 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 KIAA1755Q5JYT7 1200 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 FAM160B2Q86V87 743 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 TTC14Q96N46 770 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 TCP11L1Q9NUJ3 509 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
VPS33B-206ENST00000557358 VWA5AO00534 786 aa16.27■□□□□ 0.2
VPS33B-206ENST00000557358 PEX10O60683 326 aa16.27■□□□□ 0.2
VPS33B-206ENST00000557358 TOP1P11387 765 aaKnown RBP16.27■□□□□ 0.2
VPS33B-206ENST00000557358 CCL5P13501 91 aa16.27■□□□□ 0.2
VPS33B-206ENST00000557358 PTPREP23469 700 aa16.27■□□□□ 0.2
VPS33B-206ENST00000557358 STAT3P40763 770 aa16.27■□□□□ 0.2
VPS33B-206ENST00000557358 STAT2P52630 851 aa16.27■□□□□ 0.2
VPS33B-206ENST00000557358 KIFC2Q96AC6 838 aa16.27■□□□□ 0.2
VPS33B-206ENST00000557358 GMCL1Q96IK5 515 aa16.27■□□□□ 0.2
VPS33B-206ENST00000557358 NUP88Q99567 741 aaPredicted RBP16.27■□□□□ 0.2
VPS33B-206ENST00000557358 MOV10L1Q9BXT6 1211 aaKnown RBP16.27■□□□□ 0.2
VPS33B-206ENST00000557358 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
VPS33B-206ENST00000557358 GJB1P08034 283 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 FCER1AP12319 257 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 ERCC3P19447 782 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 MORN1Q5T089 497 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 MFSD14CQ5VZR4 134 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 TEX13BQ9BXU2 312 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 HMX1Q9NP08 348 aaPredicted RBP16.26■□□□□ 0.19
VPS33B-206ENST00000557358 INCENPQ9NQS7 918 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 FBXO28Q9NVF7 368 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 ADAMTS5Q9UNA0 930 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 MTMR7Q9Y216 660 aa16.26■□□□□ 0.19
VPS33B-206ENST00000557358 POTEFA5A3E0 1075 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 TMEM232C9JQI7 657 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 MCCP23508 829 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 KCTD2Q14681 263 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 TMEM132BQ14DG7 1078 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 MTFR1Q15390 333 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 BMP2KLQ5H9B9 411 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 RIOX2Q8IUF8 465 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 TBC1D10CQ8IV04 446 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 ABRAQ8N0Z2 381 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 DCAF4Q8WV16 495 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 UBAC1Q9BSL1 405 aa16.25■□□□□ 0.19
VPS33B-206ENST00000557358 RBBP6Q7Z6E9 1792 aaKnown RBP16.25■□□□□ 0.19
VPS33B-206ENST00000557358 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
VPS33B-206ENST00000557358 NMT2O60551 498 aa16.24■□□□□ 0.19
VPS33B-206ENST00000557358 EN2P19622 333 aaPredicted RBP16.24■□□□□ 0.19
VPS33B-206ENST00000557358 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
VPS33B-206ENST00000557358 GRB14Q14449 540 aa16.24■□□□□ 0.19
VPS33B-206ENST00000557358 RCSD1Q6JBY9 416 aa16.24■□□□□ 0.19
VPS33B-206ENST00000557358 MMP19Q99542 508 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms