RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 SDSP20132 328 aa19.66■□□□□ 0.74
VSX1-207ENST00000557285 PTPREP23469 700 aa19.66■□□□□ 0.74
VSX1-207ENST00000557285 MAP2K5Q13163 448 aa19.66■□□□□ 0.74
VSX1-207ENST00000557285 PRPF38BQ5VTL8 546 aaKnown RBP19.66■□□□□ 0.74
VSX1-207ENST00000557285 NCAPG2Q86XI2 1143 aa19.66■□□□□ 0.74
VSX1-207ENST00000557285 USP6NLQ92738 828 aa19.66■□□□□ 0.74
VSX1-207ENST00000557285 HMX1Q9NP08 348 aaPredicted RBP19.66■□□□□ 0.74
VSX1-207ENST00000557285 TOMM22Q9NS69 142 aa19.66■□□□□ 0.74
VSX1-207ENST00000557285 IGKV6D-41A0A0C4DH26 115 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 SLC15A5A6NIM6 579 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 TSPY2A6NKD2 308 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 F5H6K3 240 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 TTLL1O95922 423 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 XRCC5P13010 732 aaKnown RBP19.65■□□□□ 0.74
VSX1-207ENST00000557285 ERCC3P19447 782 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 KLRC3Q07444 240 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 RRP12Q5JTH9 1297 aaKnown RBP19.65■□□□□ 0.74
VSX1-207ENST00000557285 MB21D1Q8N884 522 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 OSBPL3Q9H4L5 887 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 PAK6Q9NQU5 681 aaPredicted RBP19.65■□□□□ 0.74
VSX1-207ENST00000557285 DIAPH3Q9NSV4 1193 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 MTMR4Q9NYA4 1195 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 CCDC171Q6TFL3 1326 aa19.65■□□□□ 0.74
VSX1-207ENST00000557285 RANBP6O60518 1105 aaKnown RBP19.64■□□□□ 0.73
VSX1-207ENST00000557285 FARP2O94887 1054 aaPredicted RBP19.64■□□□□ 0.73
VSX1-207ENST00000557285 HSPD1P10809 573 aaKnown RBP19.64■□□□□ 0.73
VSX1-207ENST00000557285 HAND2P61296 217 aa19.64■□□□□ 0.73
VSX1-207ENST00000557285 TMEM132BQ14DG7 1078 aa19.64■□□□□ 0.73
VSX1-207ENST00000557285 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
VSX1-207ENST00000557285 NEDD1Q8NHV4 660 aa19.64■□□□□ 0.73
VSX1-207ENST00000557285 PPP1R9AQ9ULJ8 1098 aa19.64■□□□□ 0.73
VSX1-207ENST00000557285 RPTORQ8N122 1335 aa19.64■□□□□ 0.73
VSX1-207ENST00000557285 NMT2O60551 498 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 FGAP02671 866 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 PDE4AP27815 886 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 SLC4A3P48751 1232 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 GRB14Q14449 540 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 DPP9Q86TI2 863 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 FLRT1Q9NZU1 646 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 MTMR7Q9Y216 660 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.63■□□□□ 0.73
VSX1-207ENST00000557285 TACC3Q9Y6A5 838 aa19.63■□□□□ 0.73
VSX1-207ENST00000557285 PLIN4Q96Q06 1357 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 VWA5AO00534 786 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 ADORA2AP29274 412 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 CACNB2Q08289 660 aaPredicted RBP19.62■□□□□ 0.73
VSX1-207ENST00000557285 ALX1Q15699 326 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 TRMT44Q8IYL2 757 aaKnown RBP19.62■□□□□ 0.73
VSX1-207ENST00000557285 NPLOC4Q8TAT6 608 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 DPF3Q92784 378 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 KIFC2Q96AC6 838 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 SLF1Q9BQI6 1058 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 STX8Q9UNK0 236 aa19.62■□□□□ 0.73
VSX1-207ENST00000557285 CCND3P30281 292 aaPredicted RBP19.61■□□□□ 0.73
VSX1-207ENST00000557285 SLFN13Q68D06 897 aa19.61■□□□□ 0.73
VSX1-207ENST00000557285 CTDP1Q9Y5B0 961 aaPredicted RBP19.61■□□□□ 0.73
VSX1-207ENST00000557285 MFAP1P55081 439 aaKnown RBP19.6■□□□□ 0.73
VSX1-207ENST00000557285 IKQ13123 557 aaPredicted RBP19.6■□□□□ 0.73
VSX1-207ENST00000557285 MAP3K21Q5TCX8 1036 aa19.6■□□□□ 0.73
VSX1-207ENST00000557285 MFSD14CQ5VZR4 134 aa19.6■□□□□ 0.73
VSX1-207ENST00000557285 SHCBP1Q8NEM2 672 aa19.6■□□□□ 0.73
VSX1-207ENST00000557285 DIS3LQ8TF46 1054 aaKnown RBP19.6■□□□□ 0.73
VSX1-207ENST00000557285 MKL1Q969V6 931 aa19.6■□□□□ 0.73
VSX1-207ENST00000557285 MROH8Q9H579 483 aa19.6■□□□□ 0.73
VSX1-207ENST00000557285 ANAPC4Q9UJX5 808 aa19.6■□□□□ 0.73
VSX1-207ENST00000557285 ZNFX1Q9P2E3 1918 aaKnown RBP19.59■□□□□ 0.73
VSX1-207ENST00000557285 CNGA1P29973 690 aa19.59■□□□□ 0.73
VSX1-207ENST00000557285 CYP2C19P33261 490 aa19.59■□□□□ 0.73
VSX1-207ENST00000557285 TICAM2Q86XR7 235 aa19.59■□□□□ 0.73
VSX1-207ENST00000557285 CPXCR1Q8N123 301 aa19.59■□□□□ 0.73
VSX1-207ENST00000557285 MMP19Q99542 508 aa19.59■□□□□ 0.73
VSX1-207ENST00000557285 IL17RBQ9NRM6 502 aa19.59■□□□□ 0.73
VSX1-207ENST00000557285 ADAMTS5Q9UNA0 930 aa19.59■□□□□ 0.73
VSX1-207ENST00000557285 ZNF236Q9UL36 1845 aa19.58■□□□□ 0.73
VSX1-207ENST00000557285 HIP1O00291 1037 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 STRNO43815 780 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 COBLO75128 1261 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 SLC25A27O95847 323 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 FCER1AP12319 257 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 BMP3P12645 472 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 MCCP23508 829 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 STAT3P40763 770 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 TTC22Q5TAA0 569 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 UBE2Q1Q7Z7E8 422 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 PRPF38AQ8NAV1 312 aaKnown RBP19.58■□□□□ 0.72
VSX1-207ENST00000557285 GMCL1P1Q8NEA9 526 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 PAWRQ96IZ0 340 aaKnown RBP19.58■□□□□ 0.72
VSX1-207ENST00000557285 CRISPLD2Q9H0B8 497 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 FEM1BQ9UK73 627 aa19.58■□□□□ 0.72
VSX1-207ENST00000557285 ZNF214Q9UL59 606 aaPredicted RBP19.58■□□□□ 0.72
VSX1-207ENST00000557285 ORC4O43929 436 aa19.57■□□□□ 0.72
VSX1-207ENST00000557285 PGK2P07205 417 aa19.57■□□□□ 0.72
VSX1-207ENST00000557285 GSPT1P15170 499 aaKnown RBP19.57■□□□□ 0.72
VSX1-207ENST00000557285 SLC1A4P43007 532 aa19.57■□□□□ 0.72
VSX1-207ENST00000557285 SNRNP48Q6IEG0 339 aaKnown RBP19.57■□□□□ 0.72
VSX1-207ENST00000557285 RASGRP2Q7LDG7 609 aa19.57■□□□□ 0.72
VSX1-207ENST00000557285 RIOX2Q8IUF8 465 aa19.57■□□□□ 0.72
VSX1-207ENST00000557285 TBC1D10CQ8IV04 446 aa19.57■□□□□ 0.72
VSX1-207ENST00000557285 REPS2Q8NFH8 660 aa19.57■□□□□ 0.72
VSX1-207ENST00000557285 HTATIP2Q9BUP3 242 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms