RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 TTLL7Q6ZT98 887 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 BANK1Q8NDB2 785 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 CCDC26Q8TAB7 109 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 SDR42E1Q8WUS8 393 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 DPH5Q9H2P9 285 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 ZNF287Q9HBT7 754 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 ADAM21Q9UKJ8 722 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 FHOD1Q9Y613 1164 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 PCDH11XQ9BZA7 1347 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 PCDH11YQ9BZA8 1340 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 KCNK3O14649 394 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 GUCY2DQ02846 1103 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 IQCB1Q15051 598 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 TCP11X2Q5H9J9 407 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 ADAT2Q7Z6V5 191 aaKnown RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 CUL5Q93034 780 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 OSBP2Q969R2 916 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 JRKLQ9Y4A0 524 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 CEP83Q9Y592 693 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 PXDNLA1KZ92 1463 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 TRAF5O00463 557 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 EIF6P56537 245 aaKnown RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 FAM133BQ5BKY9 247 aaKnown RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 SEL1L2Q5TEA6 688 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 STOX1Q6ZVD7 989 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 TBC1D10CQ8IV04 446 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 EEF2KMTQ96G04 330 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 EPSTI1Q96J88 318 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 DCAF5Q96JK2 942 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 CNOT6LQ96LI5 555 aaKnown RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 MRPL44Q9H9J2 332 aaKnown RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 GPCPD1Q9NPB8 672 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 BAIAP2L1Q9UHR4 511 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 ZNF609O15014 1411 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 F8W031 263 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 NCK2O43639 380 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 GCP02774 474 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 ATP6V1AP38606 617 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 TECP42680 631 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 LACTBP83111 547 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 NR5A1Q13285 461 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 CUL4BQ13620 913 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 E2F5Q15329 346 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 AKNAD1Q5T1N1 836 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 MCTP2Q6DN12 878 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 NYAP1Q6ZVC0 841 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 DAAM2Q86T65 1068 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 CRACR2BQ8N4Y2 399 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 ANKRD42Q8N9B4 389 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 N4BP2L2Q92802 583 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 FERMT2Q96AC1 680 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 NLRC4Q9NPP4 1024 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 PCDHA13Q9Y5I0 950 aa5.54□□□□□ -1.52
SYNE2-223ENST00000557005 EPN1Q9Y6I3 576 aaPredicted RBP5.54□□□□□ -1.52
SYNE2-223ENST00000557005 ZNF185O15231 689 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 PLA2G4AP47712 749 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 MXRA7P84157 204 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 EPHA10Q5JZY3 1008 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 LRCH2Q5VUJ6 765 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 ZNF654Q8IZM8 581 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 SLC39A2Q9NP94 309 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 RWDD2AQ9UIY3 292 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 ZNF652Q9Y2D9 606 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 TRIM49BA6NDI0 452 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 PRKAB2O43741 272 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 GTPBP6O43824 516 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 PNMA8AQ86V59 439 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 TRIM58Q8NG06 486 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 UHMK1Q8TAS1 419 aaKnown RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 OXER1Q8TDS5 423 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 FUCA2Q9BTY2 467 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 PLCB1Q9NQ66 1216 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 ABHD10Q9NUJ1 306 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 TEX33O43247 280 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 CALUO43852 315 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 FTCDO95954 541 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 ATP1A1P05023 1023 aaKnown RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 KCNA6P17658 529 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 CALML3P27482 149 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 SARNPP82979 210 aaKnown RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 KRT31Q15323 416 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 ZNF658Q5TYW1 1059 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 TRIML1Q8N9V2 468 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 MLXIPQ9HAP2 919 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 EPB41L5Q9HCM4 733 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 TRIM10Q9UDY6 481 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 FRMPD2Q68DX3 1309 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 DLC1Q96QB1 1528 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 TADA3O75528 432 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 MAGEA1P43355 309 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 GSTO1P78417 241 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 FMR1Q06787 632 aaKnown RBP eCLIP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 KRT79Q5XKE5 535 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 SHC4Q6S5L8 630 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 INTS8Q75QN2 995 aaKnown RBP5.53□□□□□ -1.52
SYNE2-223ENST00000557005 MB21D1Q8N884 522 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 RASGRP4Q8TDF6 673 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 CABS1Q96KC9 395 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 TRIM7Q9C029 511 aa5.53□□□□□ -1.52
SYNE2-223ENST00000557005 CEP170BQ9Y4F5 1589 aaPredicted RBP5.52□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms