RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ZAP70P43403 619 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 HUNKP57058 714 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 CXCL9Q07325 125 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 UBE4AQ14139 1066 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 TSGA10IPQ3SY00 556 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 CCDC158Q5M9N0 1113 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 DPP8Q6V1X1 898 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-244ENST00000556898 TBC1D9Q6ZT07 1266 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 FBXO33Q7Z6M2 555 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 RILPL2Q969X0 211 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 ZIC5Q96T25 663 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 ESYT1Q9BSJ8 1104 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 CFHR5Q9BXR6 569 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 ZNF408Q9H9D4 720 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 PODXL2Q9NZ53 605 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 HMG20BQ9P0W2 317 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 GGA1Q9UJY5 639 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 LTBP1Q14766 1721 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 TTC41PQ6P2S7 1318 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 DLEC1Q9Y238 1755 aa6.44□□□□□ -1.38
ATXN3-244ENST00000556898 FER1L6Q2WGJ9 1857 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 ARAP2Q8WZ64 1704 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 H7C1D1 291 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 GOLIM4O00461 696 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 GLRX3O76003 335 aaKnown RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 STAU1O95793 577 aaKnown RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 CYP2E1P05181 493 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 ARID4AP29374 1257 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 HIBADHP31937 336 aaKnown RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 GMPSP49915 693 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 HIRAP54198 1017 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 KIF23Q02241 960 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 CHAF1AQ13111 956 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 RASGRF1Q13972 1273 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 TNIP1Q15025 636 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 GRIK5Q16478 980 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 C8orf34Q49A92 452 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 RGMBQ6NW40 437 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 TMC4Q7Z404 712 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 USP48Q86UV5 1035 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 C2orf69Q8N8R5 385 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 GALNT6Q8NCL4 622 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 HAUS7Q99871 368 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 MXD3Q9BW11 206 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 IL25Q9H293 177 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 DBNDD1Q9H9R9 158 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 PIH1D3Q9NQM4 214 aaKnown RBP6.43□□□□□ -1.38
ATXN3-244ENST00000556898 KCNQ5Q9NR82 932 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 RNF186Q9NXI6 227 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 AOX1Q06278 1338 aa6.43□□□□□ -1.38
ATXN3-244ENST00000556898 COL4A5P29400 1685 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 ADAMTSL1Q8N6G6 1762 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 FAM155AB1AL88 458 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-244ENST00000556898 PIK3CDO00329 1044 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 TRPA1O75762 1119 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 GNRH1P01148 92 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 MAP2K3P46734 347 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 PKN2Q16513 984 aaKnown RBP6.42□□□□□ -1.38
ATXN3-244ENST00000556898 AOC3Q16853 763 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 BMP2KLQ5H9B9 411 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 CTU1Q7Z7A3 348 aaKnown RBP6.42□□□□□ -1.38
ATXN3-244ENST00000556898 RNF135Q8IUD6 432 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 SPATA5Q8NB90 893 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 GPATCH3Q96I76 525 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 SEC62Q99442 399 aaKnown RBP6.42□□□□□ -1.38
ATXN3-244ENST00000556898 RTFDC1Q9BY42 306 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-244ENST00000556898 GBA2Q9HCG7 927 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-244ENST00000556898 CD209Q9NNX6 404 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 CNOT7Q9UIV1 285 aaKnown RBP6.42□□□□□ -1.38
ATXN3-244ENST00000556898 MED23Q9ULK4 1368 aa6.42□□□□□ -1.38
ATXN3-244ENST00000556898 DICER1Q9UPY3 1922 aaKnown RBP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 YDJCA8MPS7 323 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 ERC2O15083 957 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 UQCRFS1P1P0C7P4 283 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 ZNF157P51786 506 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 NMIQ13287 307 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 MAP7D1Q3KQU3 841 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 C4orf17Q53FE4 359 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 CAVIN4Q5BKX8 364 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 LINC00114Q6XXX2 140 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 C15orf52Q6ZUT6 534 aaKnown RBP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 VPS37DQ86XT2 251 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 TDRD7Q8NHU6 1098 aaKnown RBP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 TRPM4Q8TD43 1214 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 DPF2Q92785 391 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 ZNF512BQ96KM6 892 aaPredicted RBP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 CALR3Q96L12 384 aaKnown RBP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 FAM227BQ96M60 508 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 CSRNP1Q96S65 589 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 FSD1Q9BTV5 496 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 ZC3H12CQ9C0D7 883 aaKnown RBP6.41□□□□□ -1.38
ATXN3-244ENST00000556898 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 RUBCNLQ9H714 662 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 PAG1Q9NWQ8 432 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 CCDC88AQ3V6T2 1871 aa6.41□□□□□ -1.38
ATXN3-244ENST00000556898 A0A0D9SFI3 127 aa6.4□□□□□ -1.38
ATXN3-244ENST00000556898 ECE2O60344 883 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms