RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SRSF3P84103 164 aaKnown RBP6.98□□□□□ -1.29
PRPF39-210ENST00000556718 CLEC16AQ2KHT3 1053 aa6.98□□□□□ -1.29
PRPF39-210ENST00000556718 VWCEQ96DN2 955 aa6.98□□□□□ -1.29
PRPF39-210ENST00000556718 CCDC74BQ96LY2 380 aa6.98□□□□□ -1.29
PRPF39-210ENST00000556718 KIF2CQ99661 725 aa6.98□□□□□ -1.29
PRPF39-210ENST00000556718 NOC4LQ9BVI4 516 aaKnown RBP6.98□□□□□ -1.29
PRPF39-210ENST00000556718 BPNT1O95861 308 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 PF4P02776 101 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 CTSHP09668 335 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 RLBP1P12271 317 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 SDHBP21912 280 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 CAMK2GQ13555 558 aaPredicted RBP6.97□□□□□ -1.29
PRPF39-210ENST00000556718 NFIXQ14938 502 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 TAF1CQ15572 869 aaPredicted RBP6.97□□□□□ -1.29
PRPF39-210ENST00000556718 CCDC84Q86UT8 332 aaPredicted RBP6.97□□□□□ -1.29
PRPF39-210ENST00000556718 USHBP1Q8N6Y0 703 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 GIPC2Q8TF65 315 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 XYLT2Q9H1B5 865 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 PRR36Q9H6K5 1346 aa6.97□□□□□ -1.29
PRPF39-210ENST00000556718 RFXAPO00287 272 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 HTR3BO95264 441 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 ZNF16P17020 682 aaPredicted RBP6.96□□□□□ -1.3
PRPF39-210ENST00000556718 RPL10P27635 214 aaKnown RBP6.96□□□□□ -1.3
PRPF39-210ENST00000556718 KRTAP10-2P60368 255 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 LMNB2Q03252 620 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 GATAD2BQ8WXI9 593 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 MRRFQ96E11 262 aaKnown RBP6.96□□□□□ -1.3
PRPF39-210ENST00000556718 SIGLEC10Q96LC7 697 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 HDAC8Q9BY41 377 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 FOXP3Q9BZS1 431 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 EPB41L4AQ9HCS5 686 aaPredicted RBP6.96□□□□□ -1.3
PRPF39-210ENST00000556718 RTEL1Q9NZ71 1219 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 PARP2Q9UGN5 583 aa6.96□□□□□ -1.3
PRPF39-210ENST00000556718 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 OTOL1A6NHN0 477 aaPredicted RBP6.95□□□□□ -1.3
PRPF39-210ENST00000556718 UNCXA6NJT0 531 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 SYN1P17600 705 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 VIPR1P32241 457 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 ST13P50502 369 aaKnown RBP6.95□□□□□ -1.3
PRPF39-210ENST00000556718 NMIQ13287 307 aaPredicted RBP6.95□□□□□ -1.3
PRPF39-210ENST00000556718 VMACQ2NL98 169 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 ZPBP2Q6X784 338 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 WAPLQ7Z5K2 1190 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 PHACTR4Q8IZ21 702 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 DACT3Q96B18 629 aaPredicted RBP6.95□□□□□ -1.3
PRPF39-210ENST00000556718 CNTD2Q9H8S5 307 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 ZMYM5Q9UJ78 669 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 IRAK3Q9Y616 596 aa6.95□□□□□ -1.3
PRPF39-210ENST00000556718 NRDCO43847 1150 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 KIR3DS1Q14943 382 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 EAPPQ56P03 285 aaPredicted RBP6.94□□□□□ -1.3
PRPF39-210ENST00000556718 TMEM151BQ8IW70 566 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 FBXO27Q8NI29 283 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 FEZF2Q8TBJ5 459 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 SYTL5Q8TDW5 730 aaPredicted RBP6.94□□□□□ -1.3
PRPF39-210ENST00000556718 MAP6Q96JE9 813 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 HHIPL1Q96JK4 782 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 FAM161BQ96MY7 647 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 PLCD4Q9BRC7 762 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 SIRT5Q9NXA8 310 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 USP31Q70CQ4 1352 aa6.94□□□□□ -1.3
PRPF39-210ENST00000556718 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
PRPF39-210ENST00000556718 DAB2P98082 770 aa6.93□□□□□ -1.3
PRPF39-210ENST00000556718 FAM160A1Q05DH4 1040 aa6.93□□□□□ -1.3
PRPF39-210ENST00000556718 SLC14A2Q15849 920 aa6.93□□□□□ -1.3
PRPF39-210ENST00000556718 SKOR2Q2VWA4 1001 aaPredicted RBP6.93□□□□□ -1.3
PRPF39-210ENST00000556718 RNF111Q6ZNA4 994 aa6.93□□□□□ -1.3
PRPF39-210ENST00000556718 CEP128Q6ZU80 1094 aa6.93□□□□□ -1.3
PRPF39-210ENST00000556718 TMC3Q7Z5M5 1100 aa6.93□□□□□ -1.3
PRPF39-210ENST00000556718 TCTN2Q96GX1 697 aa6.93□□□□□ -1.3
PRPF39-210ENST00000556718 RHOVQ96L33 236 aa6.93□□□□□ -1.3
PRPF39-210ENST00000556718 UBOX5O94941 541 aa6.92□□□□□ -1.3
PRPF39-210ENST00000556718 GBP1P32455 592 aa6.92□□□□□ -1.3
PRPF39-210ENST00000556718 CDR1P51861 262 aa6.92□□□□□ -1.3
PRPF39-210ENST00000556718 PSMD2Q13200 908 aa6.92□□□□□ -1.3
PRPF39-210ENST00000556718 SNW1Q13573 536 aaKnown RBP6.92□□□□□ -1.3
PRPF39-210ENST00000556718 TMEFF1Q8IYR6 380 aa6.92□□□□□ -1.3
PRPF39-210ENST00000556718 ASCC2Q9H1I8 757 aaPredicted RBP6.92□□□□□ -1.3
PRPF39-210ENST00000556718 CRTAC1Q9NQ79 661 aa6.92□□□□□ -1.3
PRPF39-210ENST00000556718 TCFL5Q9UL49 500 aa6.92□□□□□ -1.3
PRPF39-210ENST00000556718 SLC22A31A6NKX4 558 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 HRKO00198 91 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 RGS13O14921 159 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 N4BP3O15049 544 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 FKTNO75072 461 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 ITGAEP38570 1179 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 KIR2DL1P43626 348 aaPredicted RBP6.91□□□□□ -1.3
PRPF39-210ENST00000556718 KIR2DL2P43627 348 aaPredicted RBP6.91□□□□□ -1.3
PRPF39-210ENST00000556718 BBS9Q3SYG4 887 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 CXorf38Q8TB03 319 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 ENOX1Q8TC92 643 aaKnown RBP6.91□□□□□ -1.3
PRPF39-210ENST00000556718 MINPP1Q9UNW1 487 aa6.91□□□□□ -1.3
PRPF39-210ENST00000556718 IRS4O14654 1257 aaPredicted RBP6.9□□□□□ -1.3
PRPF39-210ENST00000556718 SASH1O94885 1247 aa6.9□□□□□ -1.3
PRPF39-210ENST00000556718 SYPP08247 313 aa6.9□□□□□ -1.3
PRPF39-210ENST00000556718 PNLIPP16233 465 aa6.9□□□□□ -1.3
PRPF39-210ENST00000556718 GBP2P32456 591 aaPredicted RBP6.9□□□□□ -1.3
PRPF39-210ENST00000556718 YBX1P67809 324 aaKnown RBP6.9□□□□□ -1.3
PRPF39-210ENST00000556718 DIEXFQ68CQ4 756 aaKnown RBP6.9□□□□□ -1.3
PRPF39-210ENST00000556718 ZDHHC14Q8IZN3 488 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms