RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 ERVK-24P63145 666 aa28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 RCSD1Q6JBY9 416 aa28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 TMEM47Q9BQJ4 181 aa28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 ZKSCAN3Q9BRR0 538 aa28.94■■■□□ 2.22
SDR39U1-221ENST00000556707 FMNL1O95466 1100 aaPredicted RBP28.93■■■□□ 2.22
SDR39U1-221ENST00000556707 GMCL1Q96IK5 515 aa28.93■■■□□ 2.22
SDR39U1-221ENST00000556707 FBXO28Q9NVF7 368 aa28.93■■■□□ 2.22
SDR39U1-221ENST00000556707 SLC27A2O14975 620 aa28.92■■■□□ 2.22
SDR39U1-221ENST00000556707 CNMDO75829 334 aa28.92■■■□□ 2.22
SDR39U1-221ENST00000556707 CREB3L3Q68CJ9 461 aa28.92■■■□□ 2.22
SDR39U1-221ENST00000556707 FBXO46Q6PJ61 603 aaPredicted RBP28.92■■■□□ 2.22
SDR39U1-221ENST00000556707 STOX1Q6ZVD7 989 aa28.92■■■□□ 2.22
SDR39U1-221ENST00000556707 DGKHQ86XP1 1220 aa28.92■■■□□ 2.22
SDR39U1-221ENST00000556707 ZSCAN10Q96SZ4 725 aaPredicted RBP28.92■■■□□ 2.22
SDR39U1-221ENST00000556707 Q3C1V9 767 aa28.91■■■□□ 2.22
SDR39U1-221ENST00000556707 RALYLQ86SE5 291 aaKnown RBP28.91■■■□□ 2.22
SDR39U1-221ENST00000556707 MB21D1Q8N884 522 aa28.91■■■□□ 2.22
SDR39U1-221ENST00000556707 NCOA7Q8NI08 942 aa28.91■■■□□ 2.22
SDR39U1-221ENST00000556707 ATG4CQ96DT6 458 aa28.91■■■□□ 2.22
SDR39U1-221ENST00000556707 BTBD7Q9P203 1132 aa28.91■■■□□ 2.22
SDR39U1-221ENST00000556707 PPP1R9AQ9ULJ8 1098 aa28.91■■■□□ 2.22
SDR39U1-221ENST00000556707 BMP3P12645 472 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 MCCP23508 829 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 HOXD10P28358 340 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 SLC1A4P43007 532 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 SAMD1Q6SPF0 538 aaPredicted RBP28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 CYB5R4Q7L1T6 521 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 ANKS1AQ92625 1134 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 SLF1Q9BQI6 1058 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 UBAC1Q9BSL1 405 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 ADAMTS5Q9UNA0 930 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 PTPN22Q9Y2R2 807 aa28.9■■■□□ 2.22
SDR39U1-221ENST00000556707 ENAHQ8N8S7 591 aaPredicted RBP28.89■■■□□ 2.22
SDR39U1-221ENST00000556707 SRRDQ9UH36 339 aa28.89■■■□□ 2.22
SDR39U1-221ENST00000556707 FEM1BQ9UK73 627 aa28.89■■■□□ 2.22
SDR39U1-221ENST00000556707 TNKSO95271 1327 aa28.89■■■□□ 2.21
SDR39U1-221ENST00000556707 TNPO2O14787 897 aaKnown RBP28.88■■■□□ 2.21
SDR39U1-221ENST00000556707 REC8O95072 547 aa28.88■■■□□ 2.21
SDR39U1-221ENST00000556707 PRMT2P55345 433 aa28.88■■■□□ 2.21
SDR39U1-221ENST00000556707 CCNA1P78396 465 aa28.88■■■□□ 2.21
SDR39U1-221ENST00000556707 RNF20Q5VTR2 975 aa28.88■■■□□ 2.21
SDR39U1-221ENST00000556707 PRPF38AQ8NAV1 312 aaKnown RBP28.88■■■□□ 2.21
SDR39U1-221ENST00000556707 DCAF4Q8WV16 495 aa28.88■■■□□ 2.21
SDR39U1-221ENST00000556707 HTTP42858 3142 aa28.87■■■□□ 2.21
SDR39U1-221ENST00000556707 CHMP4CQ96CF2 233 aa28.87■■■□□ 2.21
SDR39U1-221ENST00000556707 MTMR7Q9Y216 660 aa28.87■■■□□ 2.21
SDR39U1-221ENST00000556707 PLXNB2O15031 1838 aa28.86■■■□□ 2.21
SDR39U1-221ENST00000556707 VWA5AO00534 786 aa28.86■■■□□ 2.21
SDR39U1-221ENST00000556707 MAPK4P31152 587 aa28.86■■■□□ 2.21
SDR39U1-221ENST00000556707 MB21D2Q8IYB1 491 aaPredicted RBP28.86■■■□□ 2.21
SDR39U1-221ENST00000556707 COA7Q96BR5 231 aa28.86■■■□□ 2.21
SDR39U1-221ENST00000556707 PORCNQ9H237 461 aa28.86■■■□□ 2.21
SDR39U1-221ENST00000556707 ISY1Q9ULR0 285 aaKnown RBP28.86■■■□□ 2.21
SDR39U1-221ENST00000556707 TMEM232C9JQI7 657 aa28.85■■■□□ 2.21
SDR39U1-221ENST00000556707 PLA2G6O60733 806 aa28.85■■■□□ 2.21
SDR39U1-221ENST00000556707 SEC23AQ15436 765 aa28.85■■■□□ 2.21
SDR39U1-221ENST00000556707 RASGRP2Q7LDG7 609 aa28.85■■■□□ 2.21
SDR39U1-221ENST00000556707 CCAR1Q8IX12 1150 aaKnown RBP28.85■■■□□ 2.21
SDR39U1-221ENST00000556707 CHURC1Q8WUH1 139 aa28.85■■■□□ 2.21
SDR39U1-221ENST00000556707 ABHD8Q96I13 439 aa28.85■■■□□ 2.21
SDR39U1-221ENST00000556707 SPATC1LQ9H0A9 340 aa28.85■■■□□ 2.21
SDR39U1-221ENST00000556707 STAT2P52630 851 aa28.84■■■□□ 2.21
SDR39U1-221ENST00000556707 CCDC96Q2M329 555 aa28.84■■■□□ 2.21
SDR39U1-221ENST00000556707 KCTD1Q719H9 257 aa28.84■■■□□ 2.21
SDR39U1-221ENST00000556707 FAM160B2Q86V87 743 aa28.84■■■□□ 2.21
SDR39U1-221ENST00000556707 PNMA1Q8ND90 353 aa28.84■■■□□ 2.21
SDR39U1-221ENST00000556707 KAT14Q9H8E8 782 aa28.84■■■□□ 2.21
SDR39U1-221ENST00000556707 PTCH2Q9Y6C5 1203 aa28.84■■■□□ 2.21
SDR39U1-221ENST00000556707 ZNFX1Q9P2E3 1918 aaKnown RBP28.84■■■□□ 2.21
SDR39U1-221ENST00000556707 PDHBP11177 359 aa28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 PRKCZQ05513 592 aa28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 TMEM132BQ14DG7 1078 aa28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 TSGA10IPQ3SY00 556 aa28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 IFIT1BQ5T764 474 aaKnown RBP28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 REPS2Q8NFH8 660 aa28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 KIFC2Q96AC6 838 aa28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 MOV10L1Q9BXT6 1211 aaKnown RBP28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 GABRQQ9UN88 632 aa28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 HPS5Q9UPZ3 1129 aa28.83■■■□□ 2.21
SDR39U1-221ENST00000556707 IFIT3O14879 490 aaKnown RBP28.82■■■□□ 2.2
SDR39U1-221ENST00000556707 SNHG28P0DPA3 235 aa28.82■■■□□ 2.2
SDR39U1-221ENST00000556707 ANTXR2P58335 489 aa28.82■■■□□ 2.2
SDR39U1-221ENST00000556707 PLS1Q14651 629 aa28.82■■■□□ 2.2
SDR39U1-221ENST00000556707 SART3Q15020 963 aaKnown RBP28.82■■■□□ 2.2
SDR39U1-221ENST00000556707 EPB41L2O43491 1005 aaKnown RBP28.81■■■□□ 2.2
SDR39U1-221ENST00000556707 ZKSCAN1P17029 563 aaPredicted RBP28.81■■■□□ 2.2
SDR39U1-221ENST00000556707 IKQ13123 557 aaPredicted RBP28.81■■■□□ 2.2
SDR39U1-221ENST00000556707 CHST3Q7LGC8 479 aa28.81■■■□□ 2.2
SDR39U1-221ENST00000556707 GPR142Q7Z601 462 aa28.81■■■□□ 2.2
SDR39U1-221ENST00000556707 PLEKHH3Q7Z736 793 aa28.81■■■□□ 2.2
SDR39U1-221ENST00000556707 RASEFQ8IZ41 740 aa28.81■■■□□ 2.2
SDR39U1-221ENST00000556707 SHCBP1Q8NEM2 672 aa28.81■■■□□ 2.2
SDR39U1-221ENST00000556707 ERICH2A1L162 156 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 ZBED4O75132 1171 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 FDX1P10109 184 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 MCM5P33992 734 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 FLT3LGP49771 235 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 RAET1EQ8TD07 263 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 KCNB2Q92953 911 aa28.8■■■□□ 2.2
SDR39U1-221ENST00000556707 MTA3Q9BTC8 594 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms