RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 SLC22A31A6NKX4 558 aa7.8□□□□□ -1.16
PCNX4-212ENST00000556360 ATE1O95260 518 aa7.8□□□□□ -1.16
PCNX4-212ENST00000556360 EFEMP2O95967 443 aa7.8□□□□□ -1.16
PCNX4-212ENST00000556360 LCE5AQ5TCM9 118 aa7.8□□□□□ -1.16
PCNX4-212ENST00000556360 ZNF655Q8N720 491 aaPredicted RBP7.8□□□□□ -1.16
PCNX4-212ENST00000556360 GBP1P32455 592 aa7.79□□□□□ -1.16
PCNX4-212ENST00000556360 KIR2DL1P43626 348 aaPredicted RBP7.79□□□□□ -1.16
PCNX4-212ENST00000556360 KIR2DL2P43627 348 aaPredicted RBP7.79□□□□□ -1.16
PCNX4-212ENST00000556360 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.79□□□□□ -1.16
PCNX4-212ENST00000556360 IRF2BPLQ9H1B7 796 aa7.79□□□□□ -1.16
PCNX4-212ENST00000556360 ASCC2Q9H1I8 757 aaPredicted RBP7.79□□□□□ -1.16
PCNX4-212ENST00000556360 CRTAC1Q9NQ79 661 aa7.79□□□□□ -1.16
PCNX4-212ENST00000556360 B8ZZF3 427 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 NRDCO43847 1150 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 GREM1O60565 184 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 PDE6BP35913 854 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 ITGAEP38570 1179 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 MLECQ14165 292 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 CWF19L2Q2TBE0 894 aaKnown RBP7.78□□□□□ -1.16
PCNX4-212ENST00000556360 NBPF9Q3BBW0 867 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 LINC00116Q8NCU8 138 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 MAP6Q96JE9 813 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 KBTBD4Q9NVX7 518 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 GMIPQ9P107 970 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 VTI1BQ9UEU0 232 aa7.78□□□□□ -1.16
PCNX4-212ENST00000556360 TMEM82A0PJX8 343 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 OR14I1A6ND48 311 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 HOXA5P20719 270 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 TAGLNQ01995 201 aaKnown RBP7.77□□□□□ -1.17
PCNX4-212ENST00000556360 ARSHQ5FYA8 562 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 NBPF12Q5TAG4 269 aaPredicted RBP7.77□□□□□ -1.17
PCNX4-212ENST00000556360 CDCP2Q5VXM1 449 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 FBXL19Q6PCT2 694 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 TCTN2Q96GX1 697 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 KRTAP9-3Q9BYQ3 159 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 MRS2Q9HD23 443 aa7.77□□□□□ -1.17
PCNX4-212ENST00000556360 MINDY4BA8MYZ0 360 aa7.76□□□□□ -1.17
PCNX4-212ENST00000556360 USP2O75604 605 aaPredicted RBP7.76□□□□□ -1.17
PCNX4-212ENST00000556360 ERCC3P19447 782 aa7.76□□□□□ -1.17
PCNX4-212ENST00000556360 BBS9Q3SYG4 887 aa7.76□□□□□ -1.17
PCNX4-212ENST00000556360 C20orf173Q96LM9 149 aa7.76□□□□□ -1.17
PCNX4-212ENST00000556360 FOXP3Q9BZS1 431 aa7.76□□□□□ -1.17
PCNX4-212ENST00000556360 EHMT1Q9H9B1 1298 aa7.76□□□□□ -1.17
PCNX4-212ENST00000556360 BRMS1Q9HCU9 246 aa7.76□□□□□ -1.17
PCNX4-212ENST00000556360 CNOT6Q9ULM6 557 aaKnown RBP7.76□□□□□ -1.17
PCNX4-212ENST00000556360 RAG1P15918 1043 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 CTSWP56202 376 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 PCBP3P57721 371 aaKnown RBP7.75□□□□□ -1.17
PCNX4-212ENST00000556360 RAD51AP2Q09MP3 1159 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 ZNF385BQ569K4 471 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 TMC3Q7Z5M5 1100 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 HHIPL1Q96JK4 782 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 KCNC2Q96PR1 638 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 SGPP1Q9BX95 441 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 CNNM2Q9H8M5 875 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 PARD6AQ9NPB6 346 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 MBD1Q9UIS9 605 aaPredicted RBP7.75□□□□□ -1.17
PCNX4-212ENST00000556360 TCFL5Q9UL49 500 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 KCTD3Q9Y597 815 aa7.75□□□□□ -1.17
PCNX4-212ENST00000556360 SUPT16HQ9Y5B9 1047 aaKnown RBP7.75□□□□□ -1.17
PCNX4-212ENST00000556360 TLR3O15455 904 aaKnown RBP7.74□□□□□ -1.17
PCNX4-212ENST00000556360 RPL10P27635 214 aaKnown RBP7.74□□□□□ -1.17
PCNX4-212ENST00000556360 CCNFP41002 786 aa7.74□□□□□ -1.17
PCNX4-212ENST00000556360 GALK1P51570 392 aa7.74□□□□□ -1.17
PCNX4-212ENST00000556360 CHMP4BP1P59074 171 aa7.74□□□□□ -1.17
PCNX4-212ENST00000556360 YBX1P67809 324 aaKnown RBP7.74□□□□□ -1.17
PCNX4-212ENST00000556360 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
PCNX4-212ENST00000556360 TMEM132EQ6IEE7 984 aa7.74□□□□□ -1.17
PCNX4-212ENST00000556360 WAPLQ7Z5K2 1190 aa7.74□□□□□ -1.17
PCNX4-212ENST00000556360 COPRSQ9NQ92 184 aa7.74□□□□□ -1.17
PCNX4-212ENST00000556360 PCDHB14Q9Y5E9 798 aa7.74□□□□□ -1.17
PCNX4-212ENST00000556360 RFXAPO00287 272 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 SIGLEC6O43699 453 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 PNLIPP16233 465 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 EIF4A3P38919 411 aaKnown RBP7.73□□□□□ -1.17
PCNX4-212ENST00000556360 SNW1Q13573 536 aaKnown RBP7.73□□□□□ -1.17
PCNX4-212ENST00000556360 SSPNQ14714 243 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 ADGRF1Q5T601 910 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 TCERG1LQ5VWI1 586 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 AEBP1Q8IUX7 1158 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 TMEM151BQ8IW70 566 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 ZMYM5Q9UJ78 669 aa7.73□□□□□ -1.17
PCNX4-212ENST00000556360 BUD31P41223 144 aaPredicted RBP7.72□□□□□ -1.17
PCNX4-212ENST00000556360 ERVFRD-1P60508 538 aa7.72□□□□□ -1.17
PCNX4-212ENST00000556360 CEP128Q6ZU80 1094 aa7.72□□□□□ -1.17
PCNX4-212ENST00000556360 FCRL2Q96LA5 508 aaPredicted RBP7.72□□□□□ -1.17
PCNX4-212ENST00000556360 KRTAP4-5Q9BYR2 181 aa7.72□□□□□ -1.17
PCNX4-212ENST00000556360 TNFRSF10DQ9UBN6 386 aa7.72□□□□□ -1.17
PCNX4-212ENST00000556360 PRAMEF1O95521 474 aa7.71□□□□□ -1.18
PCNX4-212ENST00000556360 POLR2BP30876 1174 aaKnown RBP7.71□□□□□ -1.18
PCNX4-212ENST00000556360 CRKP46108 304 aa7.71□□□□□ -1.18
PCNX4-212ENST00000556360 SLC14A2Q15849 920 aa7.71□□□□□ -1.18
PCNX4-212ENST00000556360 REXO1Q8N1G1 1221 aaKnown RBP7.71□□□□□ -1.18
PCNX4-212ENST00000556360 MARCH10Q8NA82 808 aaPredicted RBP7.71□□□□□ -1.18
PCNX4-212ENST00000556360 ATG4CQ96DT6 458 aa7.71□□□□□ -1.18
PCNX4-212ENST00000556360 SIGLEC10Q96LC7 697 aa7.71□□□□□ -1.18
PCNX4-212ENST00000556360 PRDM14Q9GZV8 571 aa7.71□□□□□ -1.18
PCNX4-212ENST00000556360 MEIS3P2A8K0S8 358 aa7.7□□□□□ -1.18
PCNX4-212ENST00000556360 FADS2P1A8MWK0 482 aa7.7□□□□□ -1.18
PCNX4-212ENST00000556360 IRS4O14654 1257 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms