RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 POMZP3Q6PJE2 187 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 OGFOD3Q6PK18 319 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 PRR23CQ6ZRP0 262 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 PPFIBP1Q86W92 1011 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 HOMER1Q86YM7 354 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 ZSWIM2Q8NEG5 633 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 SH3TC2Q8TF17 1288 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 C7orf69Q9H7B7 122 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 PRR13Q9NZ81 148 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 PFDN2Q9UHV9 154 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 ZMYM5Q9UJ78 669 aa6.25□□□□□ -1.41
CDKN3-210ENST00000556305 HMX2A2RU54 273 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 IGF2BP3O00425 579 aaKnown RBP eCLIP6.24□□□□□ -1.41
CDKN3-210ENST00000556305 ENPP3O14638 875 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 DYRK3O43781 588 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 CDC45O75419 566 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 EPHX1P07099 455 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 LONRF2Q1L5Z9 754 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 AXDND1Q5T1B0 1012 aaPredicted RBP6.24□□□□□ -1.41
CDKN3-210ENST00000556305 PIWIL2Q8TC59 973 aaKnown RBP6.24□□□□□ -1.41
CDKN3-210ENST00000556305 APPBP2Q92624 585 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 SLC26A8Q96RN1 970 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 DBNDD2Q9BQY9 259 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 SPATA9Q9BWV2 254 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 ATG3Q9NT62 314 aa6.24□□□□□ -1.41
CDKN3-210ENST00000556305 A0A087WZG4 1122 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 EOMESO95936 686 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 CD247P20963 164 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 HSP90AA2PQ14568 343 aaPredicted RBP6.23□□□□□ -1.41
CDKN3-210ENST00000556305 DCAF15Q66K64 600 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 RNF43Q68DV7 783 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 C22orf34Q6ZV56 151 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 SPATC1Q76KD6 591 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 NBPF11Q86T75 865 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 MFSD4AQ8N468 514 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 FBXL6Q8N531 539 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 RIN3Q8TB24 985 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 RNPC3Q96LT9 517 aaKnown RBP6.23□□□□□ -1.41
CDKN3-210ENST00000556305 DSCC1Q9BVC3 393 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 OSBPL1AQ9BXW6 950 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 KLHL25Q9H0H3 589 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 TMX1Q9H3N1 280 aa6.23□□□□□ -1.41
CDKN3-210ENST00000556305 CCDC163A0A0D9SF12 145 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 FAM155AB1AL88 458 aaPredicted RBP6.22□□□□□ -1.41
CDKN3-210ENST00000556305 LEFTY1O75610 366 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 CBX7O95931 251 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 CLEC16AQ2KHT3 1053 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 SYNPOQ8N3V7 929 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 LRRN4CLQ8ND94 238 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 VWCEQ96DN2 955 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 FGD4Q96M96 766 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 MFSD14AQ96MC6 490 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 TRIT1Q9H3H1 467 aaKnown RBP6.22□□□□□ -1.41
CDKN3-210ENST00000556305 GP6Q9HCN6 339 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 TPSG1Q9NRR2 321 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 SF3B6Q9Y3B4 125 aaKnown RBP6.22□□□□□ -1.41
CDKN3-210ENST00000556305 FHOD1Q9Y613 1164 aa6.22□□□□□ -1.41
CDKN3-210ENST00000556305 CBFA2T2O43439 604 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 DIAPH1O60610 1272 aaKnown RBP6.21□□□□□ -1.42
CDKN3-210ENST00000556305 H2AFB1P0C5Y9 115 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 H2AFB2P0C5Z0 115 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 NFIAQ12857 509 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 TMEM67Q5HYA8 995 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 SLC51AQ86UW1 340 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 NLGN1Q8N2Q7 840 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 LILRB2Q8N423 598 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 ZBTB38Q8NAP3 1195 aaPredicted RBP6.21□□□□□ -1.42
CDKN3-210ENST00000556305 DTWD2Q8NBA8 298 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 BVESQ8NE79 360 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 ENOX1Q8TC92 643 aaKnown RBP6.21□□□□□ -1.42
CDKN3-210ENST00000556305 RCC1LQ96I51 464 aaKnown RBP6.21□□□□□ -1.42
CDKN3-210ENST00000556305 CDC6Q99741 560 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 MKNK2Q9HBH9 465 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 FANCLQ9NW38 375 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 TMEM260Q9NX78 707 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 DIS3Q9Y2L1 958 aaKnown RBP6.21□□□□□ -1.42
CDKN3-210ENST00000556305 ZNF451Q9Y4E5 1061 aa6.21□□□□□ -1.42
CDKN3-210ENST00000556305 TRAV20A0A0B4J274 112 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 ZNF865P0CJ78 1059 aaPredicted RBP6.2□□□□□ -1.42
CDKN3-210ENST00000556305 NMIQ13287 307 aaPredicted RBP6.2□□□□□ -1.42
CDKN3-210ENST00000556305 LRP8Q14114 963 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 TCEA2Q15560 299 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 CWF19L1Q69YN2 538 aaKnown RBP6.2□□□□□ -1.42
CDKN3-210ENST00000556305 JMYQ8N9B5 988 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 SYTL5Q8TDW5 730 aaPredicted RBP6.2□□□□□ -1.42
CDKN3-210ENST00000556305 AARSD1Q9BTE6 412 aaKnown RBP6.2□□□□□ -1.42
CDKN3-210ENST00000556305 PRDM14Q9GZV8 571 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 GPATCH2Q9NW75 528 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 SUSD2Q9UGT4 822 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 AKT3Q9Y243 479 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 PTCH2Q9Y6C5 1203 aa6.2□□□□□ -1.42
CDKN3-210ENST00000556305 COL17A1Q9UMD9 1497 aaPredicted RBP6.2□□□□□ -1.42
CDKN3-210ENST00000556305 ANKRD62A6NC57 917 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 SIGLEC6O43699 453 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 IGLV1-40P01703 118 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 APPP05067 770 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 HMGB1P09429 215 aaKnown RBP6.19□□□□□ -1.42
CDKN3-210ENST00000556305 ADMP35318 185 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 GRB10Q13322 594 aa6.19□□□□□ -1.42
CDKN3-210ENST00000556305 PLEKHG4Q58EX7 1191 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms