RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 CCDC102AQ96A19 550 aa16.71■□□□□ 0.27
NEK9-209ENST00000556170 TCEAL9Q9UHQ7 104 aa16.71■□□□□ 0.27
NEK9-209ENST00000556170 FBXO2Q9UK22 296 aaPredicted RBP16.71■□□□□ 0.27
NEK9-209ENST00000556170 TTF2Q9UNY4 1162 aaKnown RBP16.71■□□□□ 0.27
NEK9-209ENST00000556170 CASP14P31944 242 aa16.71■□□□□ 0.27
NEK9-209ENST00000556170 FMR1Q06787 632 aaKnown RBP eCLIP16.71■□□□□ 0.271e-6■■■■□ 23.7
NEK9-209ENST00000556170 NONOQ15233 471 aaKnown RBP eCLIP16.71■□□□□ 0.27
NEK9-209ENST00000556170 CCDC40Q4G0X9 1142 aa16.71■□□□□ 0.27
NEK9-209ENST00000556170 CCDC43Q96MW1 224 aaKnown RBP16.71■□□□□ 0.27
NEK9-209ENST00000556170 KDM4FA0A1W2PPD8 638 aa16.71■□□□□ 0.27
NEK9-209ENST00000556170 SPATA1Q5VX52 437 aa16.71■□□□□ 0.27
NEK9-209ENST00000556170 CAPZA3Q96KX2 299 aa16.71■□□□□ 0.27
NEK9-209ENST00000556170 TBC1D7Q9P0N9 293 aa16.71■□□□□ 0.27
NEK9-209ENST00000556170 CTDP1Q9Y5B0 961 aaPredicted RBP16.71■□□□□ 0.27
NEK9-209ENST00000556170 SERPINB2P05120 415 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 TOB1P50616 345 aaPredicted RBP16.7■□□□□ 0.26
NEK9-209ENST00000556170 CCZ1BP86790 482 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 CCZ1P86791 482 aaPredicted RBP16.7■□□□□ 0.26
NEK9-209ENST00000556170 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 KRT222Q8N1A0 295 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
NEK9-209ENST00000556170 TEX33O43247 280 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 CABP7Q86V35 215 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 GDAQ9Y2T3 454 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 AKR1B10O60218 316 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 TRIM37O94972 964 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 NCBP1Q09161 790 aaKnown RBP16.7■□□□□ 0.26
NEK9-209ENST00000556170 KRT79Q5XKE5 535 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 CNGA4Q8IV77 575 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
NEK9-209ENST00000556170 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 KIAA0825Q8IV33 1275 aa16.7■□□□□ 0.26
NEK9-209ENST00000556170 XDHP47989 1333 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 STK36Q9NRP7 1315 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 CUL4BQ13620 913 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 SF3B3Q15393 1217 aaKnown RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 FOXP4Q8IVH2 680 aaPredicted RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 REXO1Q8N1G1 1221 aaKnown RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 GTPBP4Q9BZE4 634 aaKnown RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 FAM170AA1A519 330 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 SOWAHDA6NJG2 315 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 SEMA3EO15041 775 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 PPP2R3AQ06190 1150 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 RBL2Q08999 1139 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 MORC3Q14149 939 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 CCDC181Q5TID7 509 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 COA7Q96BR5 231 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
NEK9-209ENST00000556170 RPN1P04843 607 aaKnown RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 E4F1Q66K89 784 aaPredicted RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 ENOX1Q8TC92 643 aaKnown RBP16.69■□□□□ 0.26
NEK9-209ENST00000556170 MYO1BO43795 1136 aa16.68■□□□□ 0.26
NEK9-209ENST00000556170 SLC16A2P36021 539 aa16.68■□□□□ 0.26
NEK9-209ENST00000556170 PIGSQ96S52 555 aa16.68■□□□□ 0.26
NEK9-209ENST00000556170 KCNJ18B7U540 433 aa16.68■□□□□ 0.26
NEK9-209ENST00000556170 KCNJ12Q14500 433 aa16.68■□□□□ 0.26
NEK9-209ENST00000556170 TRIML1Q8N9V2 468 aa16.68■□□□□ 0.26
NEK9-209ENST00000556170 GSDMAQ96QA5 445 aa16.68■□□□□ 0.26
NEK9-209ENST00000556170 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.68■□□□□ 0.26
NEK9-209ENST00000556170 CTAGE9A4FU28 777 aa16.68■□□□□ 0.26
NEK9-209ENST00000556170 EARS2Q5JPH6 523 aaKnown RBP16.68■□□□□ 0.26
NEK9-209ENST00000556170 MAP3K14Q99558 947 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 RIOK1Q9BRS2 568 aaKnown RBP16.67■□□□□ 0.26
NEK9-209ENST00000556170 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
NEK9-209ENST00000556170 OSBPL5Q9H0X9 879 aaPredicted RBP16.67■□□□□ 0.26
NEK9-209ENST00000556170 MACROD2A1Z1Q3 448 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 ERLIN1O75477 346 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 CLEC10AQ8IUN9 316 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 TSG101Q99816 390 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 EPC1Q9H2F5 836 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 ARFGAP3Q9NP61 516 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 SLC39A2Q9NP94 309 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
NEK9-209ENST00000556170 KIF20AO95235 890 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 CACNB3P54284 484 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 TROAPQ12815 778 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 GRAPQ13588 217 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 GRAPLQ8TC17 118 aaPredicted RBP16.67■□□□□ 0.26
NEK9-209ENST00000556170 SNX29Q8TEQ0 813 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 HINFPQ9BQA5 517 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 TMEM47Q9BQJ4 181 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 PCDHA4Q9UN74 947 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 LEMD3Q9Y2U8 911 aa16.67■□□□□ 0.26
NEK9-209ENST00000556170 MTF1Q14872 753 aa16.66■□□□□ 0.26
NEK9-209ENST00000556170 CCDC122Q5T0U0 273 aa16.66■□□□□ 0.26
NEK9-209ENST00000556170 SV2BQ7L1I2 683 aa16.66■□□□□ 0.26
NEK9-209ENST00000556170 IRX2Q9BZI1 471 aaPredicted RBP16.66■□□□□ 0.26
NEK9-209ENST00000556170 TUBE1Q9UJT0 475 aa16.66■□□□□ 0.26
NEK9-209ENST00000556170 TRIM49BA6NDI0 452 aa16.66■□□□□ 0.26
NEK9-209ENST00000556170 GTPBP6O43824 516 aaPredicted RBP16.66■□□□□ 0.26
NEK9-209ENST00000556170 PHACTR2O75167 634 aa16.66■□□□□ 0.26
NEK9-209ENST00000556170 PCP11498 1178 aaKnown RBP16.66■□□□□ 0.26
NEK9-209ENST00000556170 VEGFAP15692 232 aaPredicted RBP16.66■□□□□ 0.26
NEK9-209ENST00000556170 CDK8P49336 464 aa16.66■□□□□ 0.26
NEK9-209ENST00000556170 TOGARAM2Q6ZUX3 1019 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms