RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 INHBEP58166 350 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 RABEP1Q15276 862 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 SLC35G1Q2M3R5 365 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 APOA5Q6Q788 366 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 KCTD1Q719H9 257 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 ANKRD23Q86SG2 305 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 FAM217BQ9NTX9 383 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-210ENST00000556166 FBXO28Q9NVF7 368 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 TPCN1Q9ULQ1 816 aa13.42□□□□□ -0.26
GABRB3-210ENST00000556166 FRMPD2Q68DX3 1309 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-210ENST00000556166 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 WDR46O15213 610 aaKnown RBP13.41□□□□□ -0.26
GABRB3-210ENST00000556166 BMP3P12645 472 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 SLC1A4P43007 532 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 FGD1P98174 961 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 ZNF543Q08ER8 600 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 CATIPQ7Z7H3 387 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
GABRB3-210ENST00000556166 CPVLQ9H3G5 476 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 GPCPD1Q9NPB8 672 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 MAD2L2Q9UI95 211 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 PALM3A6NDB9 673 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L15C9J2P7 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L13C9JLJ4 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L11C9JVI0 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L18D6R9N7 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L22D6RA61 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L17D6RBQ6 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L19D6RCP7 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L20D6RJB6 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 CYP2C8P10632 490 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 PDIA3P30101 505 aaKnown RBP13.41□□□□□ -0.26
GABRB3-210ENST00000556166 USP17L24Q0WX57 530 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 GRM4Q14833 912 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 NBPF11Q86T75 865 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 CCDC144CPQ8IYA2 1237 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 NUP133Q8WUM0 1156 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 ASCC2Q9H1I8 757 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-210ENST00000556166 R3HDMLQ9H3Y0 253 aa13.41□□□□□ -0.26
GABRB3-210ENST00000556166 TMEM232C9JQI7 657 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 PEX10O60683 326 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 DDAH1O94760 285 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 LARGE1O95461 756 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 SLC16A2P36021 539 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 CCDC96Q2M329 555 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 NOL8Q76FK4 1167 aaKnown RBP13.4□□□□□ -0.26
GABRB3-210ENST00000556166 FANCBQ8NB91 859 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 TANGO6Q9C0B7 1094 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 UBA5Q9GZZ9 404 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 SLC45A1Q9Y2W3 748 aa13.4□□□□□ -0.26
GABRB3-210ENST00000556166 ZBTB43O43298 467 aa13.39□□□□□ -0.27
GABRB3-210ENST00000556166 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
GABRB3-210ENST00000556166 CDC27P30260 824 aa13.39□□□□□ -0.27
GABRB3-210ENST00000556166 COG2Q14746 738 aa13.39□□□□□ -0.27
GABRB3-210ENST00000556166 BTNL9Q6UXG8 535 aa13.39□□□□□ -0.27
GABRB3-210ENST00000556166 MICU3Q86XE3 530 aa13.39□□□□□ -0.27
GABRB3-210ENST00000556166 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-210ENST00000556166 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-210ENST00000556166 MAP3K14Q99558 947 aa13.39□□□□□ -0.27
GABRB3-210ENST00000556166 ADAMTS5Q9UNA0 930 aa13.39□□□□□ -0.27
GABRB3-210ENST00000556166 PTPRFP10586 1907 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 KLRF2D3W0D1 207 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 PLA2G6O60733 806 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 FLOT1O75955 427 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 DSG3P32926 999 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
GABRB3-210ENST00000556166 SNAP25P60880 206 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 ME3Q16798 604 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 CMTR1Q8N1G2 835 aaKnown RBP13.38□□□□□ -0.27
GABRB3-210ENST00000556166 SRBD1Q8N5C6 995 aaKnown RBP13.38□□□□□ -0.27
GABRB3-210ENST00000556166 NCOA5Q9HCD5 579 aaKnown RBP13.38□□□□□ -0.27
GABRB3-210ENST00000556166 RNF186Q9NXI6 227 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 FEM1BQ9UK73 627 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 NAP1L2Q9ULW6 460 aaPredicted RBP13.38□□□□□ -0.27
GABRB3-210ENST00000556166 PCNTO95613 3336 aa13.38□□□□□ -0.27
GABRB3-210ENST00000556166 SPDYE16A6NNV3 312 aaPredicted RBP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 CYTH3O43739 400 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 DTNBO60941 627 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 CALM1P0DP23 149 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 CALM2P0DP24 149 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 CALM3P0DP25 149 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 OSBPP22059 807 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 HERVK_113P62684 666 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 CCT2P78371 535 aaKnown RBP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 FUT2Q10981 343 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 ST3GAL1Q11201 340 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 STK3Q13188 491 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 ANKRD1Q15327 319 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 ASPRV1Q53RT3 343 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 GPATCH4Q5T3I0 446 aaKnown RBP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
GABRB3-210ENST00000556166 SYNE3Q6ZMZ3 975 aa13.37□□□□□ -0.27
GABRB3-210ENST00000556166 NECAB1Q8N987 351 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms