RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SEC23AQ15436 765 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 NTRK3Q16288 839 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 CCDC183Q5T5S1 534 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 LRSAM1Q6UWE0 723 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 SYNE3Q6ZMZ3 975 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 SH3BP5LQ7L8J4 393 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 DZIP1Q86YF9 867 aaKnown RBP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 SDR42E1Q8WUS8 393 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 ZNF396Q96N95 335 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 COA1Q9GZY4 146 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 DCP1AQ9NPI6 582 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 INCENPQ9NQS7 918 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 ORC3Q9UBD5 711 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 ARPP21Q9UBL0 812 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 RGS17Q9UGC6 210 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 POLLQ9UGP5 575 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 RCOR1Q9UKL0 485 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 NAP1L2Q9ULW6 460 aaPredicted RBP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.66□□□□□ -0.86
ATXN3-235ENST00000556082 SLC12A7Q9Y666 1083 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 PARP3Q9Y6F1 533 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 DUOX1Q9NRD9 1551 aa9.66□□□□□ -0.86
ATXN3-235ENST00000556082 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-235ENST00000556082 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 GPR75-ASB3A0A0A6YYF3 556 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 CCDC69A6NI79 296 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 MINDY4BA8MYZ0 360 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 USP17L12C9JPN9 530 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 USP17L21D6R901 530 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 FIBPO43427 364 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 ZIC2O95409 532 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-235ENST00000556082 MMP10P09238 476 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 IFNAR1P17181 557 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 WTAPQ15007 396 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 FOXD4L6Q3SYB3 417 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-235ENST00000556082 SH3D19Q5HYK7 790 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 STYK1Q6J9G0 422 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 FOXD4L3Q6VB84 417 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-235ENST00000556082 NFXL1Q6ZNB6 911 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 BRAPQ7Z569 592 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 TTC6Q86TZ1 520 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 FERMT3Q86UX7 667 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 LEO1Q8WVC0 666 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-235ENST00000556082 MASTLQ96GX5 879 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 C8orf76Q96K31 380 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 CAMKK2Q96RR4 588 aa9.65□□□□□ -0.86
ATXN3-235ENST00000556082 AATFQ9NY61 560 aaKnown RBP eCLIP9.65□□□□□ -0.86
ATXN3-235ENST00000556082 CDV3Q9UKY7 258 aaKnown RBP9.65□□□□□ -0.86
ATXN3-235ENST00000556082 ZC3H4Q9UPT8 1303 aaKnown RBP9.64□□□□□ -0.87
ATXN3-235ENST00000556082 H3BM21 787 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 DTNBO60941 627 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 UPP2O95045 317 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 CCDC178Q5BJE1 867 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 C12orf60Q5U649 245 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 PPP2R2DQ66LE6 453 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 WASF1Q92558 559 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 ANKS1AQ92625 1134 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 SPATA32Q96LK8 384 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 ZSCAN10Q96SZ4 725 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-235ENST00000556082 UBAC1Q9BSL1 405 aa9.64□□□□□ -0.87
ATXN3-235ENST00000556082 MROH7-TTC4A0A0A0MT08 1334 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 GAKO14976 1311 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 GOLGA8AA7E2F4 631 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 NR3C2P08235 984 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 CALM1P0DP23 149 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 CALM2P0DP24 149 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 CALM3P0DP25 149 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 CDC27P30260 824 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 IARSP41252 1262 aaKnown RBP9.63□□□□□ -0.87
ATXN3-235ENST00000556082 PDE4BQ07343 736 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 SLC15A2Q16348 729 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 RTN1Q16799 776 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 FAM173BQ6P4H8 233 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 IQCA1Q86XH1 822 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 FANCBQ8NB91 859 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 NOL10Q9BSC4 688 aaKnown RBP9.63□□□□□ -0.87
ATXN3-235ENST00000556082 TMX4Q9H1E5 349 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-235ENST00000556082 RTEL1Q9NZ71 1219 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 TFIP11Q9UBB9 837 aaKnown RBP9.63□□□□□ -0.87
ATXN3-235ENST00000556082 MAST2Q6P0Q8 1798 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 ROBO3Q96MS0 1386 aa9.63□□□□□ -0.87
ATXN3-235ENST00000556082 LRRC37AA6NMS7 1700 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 LTBP1Q14766 1721 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 SYCE3A1L190 88 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 FAM181BA6NEQ2 426 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 DDAH1O94760 285 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 SSRP1Q08945 709 aaKnown RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 GRIK5Q16478 980 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 RRP12Q5JTH9 1297 aaKnown RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 CC2D2BQ6DHV5 1058 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 POTEAQ6S8J7 498 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 VASH1Q7L8A9 365 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 NBPF11Q86T75 865 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 MICU3Q86XE3 530 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
ATXN3-235ENST00000556082 CRACR2BQ8N4Y2 399 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
ATXN3-235ENST00000556082 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms