RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	RIC1	Q4ADV7	1423 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	CYP2D7	A0A087X1C5	515 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	HLA-DOA	P06340	250 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	MARCH10	Q8NA82	808 aa	Predicted RBP	13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	VEZT	Q9HBM0	779 aa		13.8	□□□□□ -0.2
TMPO-212	ENST00000556029	PRR29	P0C7W0	189 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	HSPA1L	P34931	641 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	TCP10	Q12799	353 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	DOK7	Q18PE1	504 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	RBM17	Q96I25	401 aa	Known RBP	13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	TLDC2	A0PJX2	215 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	GSG1L2	A8MUP6	293 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	PTPRE	P23469	700 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	RGS22	Q8NE09	1264 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	LAMA4	Q16363	1823 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	GRIN1	Q05586	938 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	FCHSD1	Q86WN1	690 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	CSRNP2	Q9H175	543 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	TCP11L1	Q9NUJ3	509 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	VPS54	Q9P1Q0	977 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	TRPC5	Q9UL62	973 aa	Predicted RBP	13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	CTAGE15	A4D2H0	777 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	HGS	O14964	777 aa	Predicted RBP	13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	CTAGE8	P0CG41	777 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	CLCN6	P51797	869 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	PPARA	Q07869	468 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	CTAGE6	Q86UF2	777 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	CTAGE4	Q8IX94	777 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	DESI2	Q9BSY9	194 aa		13.79	□□□□□ -0.2
TMPO-212	ENST00000556029	ZNF142	P52746	1687 aa	Predicted RBP	13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	SOS2	Q07890	1332 aa	Predicted RBP	13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	ALS2	Q96Q42	1657 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	PPP1R12B	O60237	982 aa	Predicted RBP	13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	VPS36	Q86VN1	386 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	LRRN4CL	Q8ND94	238 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	PAIP2	Q9BPZ3	127 aa	Known RBP	13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	SAMSN1	Q9NSI8	373 aa	Known RBP	13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	TCRBV5S4A2T	A0A5A2	114 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	KRT2	P35908	639 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	VGLL2	Q8N8G2	317 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	OXER1	Q8TDS5	423 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	MAPK8IP1	Q9UQF2	711 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	DCC	P43146	1447 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	RNASE9	P60153	205 aa	Known RBP	13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	MFSD14B	Q5SR56	506 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	ENOX1	Q8TC92	643 aa	Known RBP	13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	SPAG5	Q96R06	1193 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	FBXO2	Q9UK22	296 aa	Predicted RBP	13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	SPEF2	Q9C093	1822 aa		13.78	□□□□□ -0.2
TMPO-212	ENST00000556029	RTL9	Q8NET4	1388 aa		13.77	□□□□□ -0.2
TMPO-212	ENST00000556029	ERVV-1	B6SEH8	477 aa		13.77	□□□□□ -0.2
TMPO-212	ENST00000556029	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.77	□□□□□ -0.2
TMPO-212	ENST00000556029	STX10	O60499	249 aa		13.77	□□□□□ -0.2
TMPO-212	ENST00000556029	MCM7	P33993	719 aa		13.77	□□□□□ -0.2
TMPO-212	ENST00000556029	ZNF174	Q15697	407 aa		13.77	□□□□□ -0.2
TMPO-212	ENST00000556029	DPP8	Q6V1X1	898 aa	Predicted RBP	13.77	□□□□□ -0.2
TMPO-212	ENST00000556029	ABCC6	O95255	1503 aa		13.77	□□□□□ -0.2
TMPO-212	ENST00000556029	SCNN1D	P51172	638 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	NAPA	P54920	295 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	FMR1	Q06787	632 aa	Known RBP eCLIP	13.77	□□□□□ -0.21	7e-9	■■■■□ 20
TMPO-212	ENST00000556029	TRIML1	Q8N9V2	468 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	STAG1	Q8WVM7	1258 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	CELF1	Q92879	486 aa	Known RBP	13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	SRPRB	Q9Y5M8	271 aa	Known RBP	13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	KCP	Q6ZWJ8	1503 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	TNKS	O95271	1327 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	PLCD1	P51178	756 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	GTF2A1	P52655	376 aa	Predicted RBP	13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	PPP2R3A	Q06190	1150 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	ZNF569	Q5MCW4	686 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	PSMD1	Q99460	953 aa		13.77	□□□□□ -0.21
TMPO-212	ENST00000556029	TOB1	P50616	345 aa	Predicted RBP	13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	TFAP4	Q01664	338 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	WDR78	Q5VTH9	848 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	TSG101	Q99816	390 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	HSD3B7	Q9H2F3	369 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	COL5A2	P05997	1499 aa	Predicted RBP	13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	EFCAB8	A8MWE9	144 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	TERF2	Q15554	542 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	TBC1D9B	Q66K14	1250 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	IGSF22	Q8N9C0	903 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	GDAP1L1	Q96MZ0	367 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	ZNF804B	A4D1E1	1349 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	AFF2	P51816	1311 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	CTNNA2	P26232	953 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	NF2	P35240	595 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	WWC2	Q6AWC2	1192 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	TOGARAM2	Q6ZUX3	1019 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	IFT81	Q8WYA0	676 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	GPCPD1	Q9NPB8	672 aa		13.76	□□□□□ -0.21
TMPO-212	ENST00000556029	FAM237A	A0A1B0GTK4	181 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	SMC1A	Q14683	1233 aa	Known RBP	13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	REXO1L1P	Q8IX06	675 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	SYNRG	Q9UMZ2	1314 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	VWA3A	A6NCI4	1184 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	DIXDC1	Q155Q3	683 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	USP49	Q70CQ1	688 aa		13.75	□□□□□ -0.21
TMPO-212	ENST00000556029	WDR66	Q8TBY9	1149 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms