RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 IGKV6D-41A0A0C4DH26 115 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 SHMT1P34896 483 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 IQCB1Q15051 598 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 SPECC1Q5M775 1068 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 KRBA2Q6ZNG9 492 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 C11orf57Q6ZUT1 292 aaPredicted RBP11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 HEATR3Q7Z4Q2 680 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 DAGLBQ8NCG7 672 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 PSMD1Q99460 953 aa11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 SEC63Q9UGP8 760 aaKnown RBP11.54□□□□□ -0.56
EFCAB11-209ENST00000556005 GOLGA6L6A8MZA4 724 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 AP5Z1O43299 807 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 PDHBP11177 359 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 NLRP12P59046 1061 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 ZNF174Q15697 407 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 LONRF3Q496Y0 759 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 ASPRV1Q53RT3 343 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 WWC2Q6AWC2 1192 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 CCDC34Q96HJ3 373 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 BPIFA3Q9BQP9 254 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 CSRNP2Q9H175 543 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 CLIP2Q9UDT6 1046 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 TUBE1Q9UJT0 475 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 ZKSCAN5Q9Y2L8 839 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 CCDC194A0A1B0GVG4 234 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 USP17L5A8MUK1 530 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 hCG_1984214I3L0E3 225 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 STXBP3O00186 592 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 MPHOSPH10O00566 681 aaKnown RBP11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 GNA11P29992 359 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 GRIN1Q05586 938 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 TCP10Q12799 353 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 SLC35G1Q2M3R5 365 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 FOXP4Q8IVH2 680 aaPredicted RBP11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 ZSCAN29Q8IWY8 852 aaPredicted RBP11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 ZNF713Q8N859 430 aaPredicted RBP11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 TRIM34Q9BYJ4 488 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 VPS33BQ9H267 617 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
EFCAB11-209ENST00000556005 BAZ2BQ9UIF8 2168 aaKnown RBP11.52□□□□□ -0.56
EFCAB11-209ENST00000556005 YDJCA8MPS7 323 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 M0R2N6 131 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 POLR2DO15514 142 aaKnown RBP11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 TPM3P06753 285 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 SNHG28P0DPA3 235 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 DPEP1P16444 411 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 CACNB3P54284 484 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 ATP2C1P98194 919 aaPredicted RBP11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 PTGDRQ13258 359 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 ZFPM1Q8IX07 1006 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 DHX40Q8IX18 779 aaKnown RBP11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 ZMYND12Q9H0C1 365 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 RIOX1Q9H6W3 641 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 C6orf50Q9HD87 102 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 PCDHA6Q9UN73 950 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 PCDHA8Q9Y5H6 950 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 PCDHAC2Q9Y5I4 1007 aa11.52□□□□□ -0.57
EFCAB11-209ENST00000556005 ENTPD3O75355 529 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 KCNA3P22001 575 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 NAPAP54920 295 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 EIF6P56537 245 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 PNOCQ13519 176 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 DPCR1Q3MIW9 517 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 CFAP100Q494V2 611 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 CERKLQ49MI3 558 aaPredicted RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 NOM1Q5C9Z4 860 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 ARL6IP4Q66PJ3 421 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 TYW1BQ6NUM6 668 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 SARM1Q6SZW1 724 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 METTL16Q86W50 562 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 HOMER1Q86YM7 354 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 LRRC47Q8N1G4 583 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 LARGE2Q8N3Y3 721 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 VAT1LQ9HCJ6 419 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 SCN9AQ15858 1988 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 DDTLA6NHG4 134 aaPredicted RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 BIN1O00499 593 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 MCM7P33993 719 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 GPATCH4Q5T3I0 446 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 RSBN1LQ6PCB5 846 aaPredicted RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 RASGRP2Q7LDG7 609 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 PLA2G4DQ86XP0 818 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 PIGSQ96S52 555 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 UBA5Q9GZZ9 404 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 CPVLQ9H3G5 476 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 TDRD3Q9H7E2 651 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 HDAC9Q9UKV0 1011 aa11.51□□□□□ -0.57
EFCAB11-209ENST00000556005 A0A087WWV3 80 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 VWA3AA6NCI4 1184 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 SMCO2A6NFE2 343 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 SMTNL1A8MU46 457 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 WNT7AO00755 349 aa11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 VIL1P09327 827 aaKnown RBP11.5□□□□□ -0.57
EFCAB11-209ENST00000556005 ZNF75DP51815 510 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms