RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 EFCAB8A8MWE9 144 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 AKR1B15C9JRZ8 316 aaPredicted RBP7.95□□□□□ -1.14
TDP1-213ENST00000555880 SEMA3EO15041 775 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 CCDC175P0C221 793 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 H2AFXP16104 143 aaPredicted RBP7.95□□□□□ -1.14
TDP1-213ENST00000555880 AFMP43652 599 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 GYG1P46976 350 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 GNG11P61952 73 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 GOLGA8FQ08AF8 430 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 GOLGA8DPQ0D2H9 430 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 VPS72Q15906 364 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 SPATA1Q5VX52 437 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 TRIM65Q6PJ69 517 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 TMCO3Q6UWJ1 677 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 ADGRA1Q86SQ6 560 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 TMEM139Q8IV31 216 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 FAM177A1Q8N128 213 aaPredicted RBP7.95□□□□□ -1.14
TDP1-213ENST00000555880 ANKRD20A12PQ8NF67 263 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 SPATA20Q8TB22 786 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 GSDMAQ96QA5 445 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 PANX2Q96RD6 677 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 RIOK1Q9BRS2 568 aaKnown RBP7.95□□□□□ -1.14
TDP1-213ENST00000555880 NAA15Q9BXJ9 866 aaKnown RBP7.95□□□□□ -1.14
TDP1-213ENST00000555880 V9GY48 417 aaPredicted RBP7.95□□□□□ -1.14
TDP1-213ENST00000555880 LAMB1P07942 1786 aa7.95□□□□□ -1.14
TDP1-213ENST00000555880 CACNA1SQ13698 1873 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 SPATA31A6Q5VVP1 1343 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 A0A1B0GTH6 734 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 VWA3AA6NCI4 1184 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 PBX2P40425 430 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 ADKP55263 362 aaKnown RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 NR1I3Q14994 352 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 FAM98CQ17RN3 349 aaKnown RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 TTC38Q5R3I4 469 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 KLHL10Q6JEL2 608 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 TMTC3Q6ZXV5 915 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 TC2NQ8N9U0 490 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 IQUBQ8NA54 791 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 MARCH10Q8NA82 808 aaPredicted RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 SYMPKQ92797 1274 aaKnown RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 PAGE5Q96GU1 130 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 CRNKL1Q9BZJ0 848 aaKnown RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 SAMSN1Q9NSI8 373 aaKnown RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 BSDC1Q9NW68 430 aaPredicted RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 ZHX1Q9UKY1 873 aaPredicted RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 PARP3Q9Y6F1 533 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 MYH14Q7Z406 1995 aaKnown RBP7.94□□□□□ -1.14
TDP1-213ENST00000555880 CASZ1Q86V15 1759 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 TADA3O75528 432 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 PRDM1O75626 825 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 PLEKHA8P1O95397 391 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 KIF5BP33176 963 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 TXLNAP40222 546 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 TRAPPC10P48553 1259 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 FAM193AP78312 1265 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 PKN1Q16512 942 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 PTPN21Q16825 1174 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 PPP1R15BQ5SWA1 713 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 CLEC4GQ6UXB4 293 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 TOGARAM2Q6ZUX3 1019 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 USP49Q70CQ1 688 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 CNGA4Q8IV77 575 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 EPSTI1Q96J88 318 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 USP21Q9UK80 565 aa7.94□□□□□ -1.14
TDP1-213ENST00000555880 CCDC88AQ3V6T2 1871 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 MAST2Q6P0Q8 1798 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 hCG_1642624A0A1W2PR95 340 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 ORC4O43929 436 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 CALML3P27482 149 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 NLRP5P59047 1200 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 DYNLL1P63167 89 aaKnown RBP7.93□□□□□ -1.14
TDP1-213ENST00000555880 ATP2C1P98194 919 aaPredicted RBP7.93□□□□□ -1.14
TDP1-213ENST00000555880 SPAG1Q07617 926 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 FUT2Q10981 343 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 TROAPQ12815 778 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 DPYDQ12882 1025 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 ITPK1Q13572 414 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 SF3B3Q15393 1217 aaKnown RBP7.93□□□□□ -1.14
TDP1-213ENST00000555880 ZNF174Q15697 407 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 CTR9Q6PD62 1173 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 TMED8Q6PL24 325 aaPredicted RBP7.93□□□□□ -1.14
TDP1-213ENST00000555880 SH3RF1Q7Z6J0 888 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 CREBRFQ8IUR6 639 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 IGSF22Q8N9C0 903 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 CCDC51Q96ER9 411 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 CARD6Q9BX69 1037 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 RMND1Q9NWS8 449 aa7.93□□□□□ -1.14
TDP1-213ENST00000555880 PDS5AQ29RF7 1337 aaKnown RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 CNTNAP5Q8WYK1 1306 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 COL1A1P02452 1464 aaPredicted RBP7.92□□□□□ -1.14
TDP1-213ENST00000555880 CYP2D7A0A087X1C5 515 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 USP17L12C9JPN9 530 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 USP17L21D6R901 530 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 KIF5CO60282 957 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 FGRP09769 529 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 SCG2P13521 617 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 STX17P56962 302 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 MAP3K9P80192 1104 aa7.92□□□□□ -1.14
TDP1-213ENST00000555880 PPP2R3AQ06190 1150 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms