RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 C1orf53Q5VUE5 145 aa23.39■■□□□ 1.33
FOXN3-211ENST00000555855 RNF180Q86T96 592 aa23.39■■□□□ 1.33
FOXN3-211ENST00000555855 BOLA2Q9H3K6 86 aa23.39■■□□□ 1.33
FOXN3-211ENST00000555855 TACC3Q9Y6A5 838 aa23.39■■□□□ 1.33
FOXN3-211ENST00000555855 SMCHD1A6NHR9 2005 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 USP17L12C9JPN9 530 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 USP17L21D6R901 530 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 ADD2P35612 726 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 FAM47AQ5JRC9 791 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 CLEC10AQ8IUN9 316 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 COL25A1Q9BXS0 654 aaPredicted RBP23.38■■□□□ 1.33
FOXN3-211ENST00000555855 SEMA6BQ9H3T3 888 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 KANSL2Q9H9L4 492 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 XPNPEP3Q9NQH7 507 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 PDLIM7Q9NR12 457 aa23.38■■□□□ 1.33
FOXN3-211ENST00000555855 EEF2P13639 858 aaKnown RBP23.37■■□□□ 1.33
FOXN3-211ENST00000555855 STAT3P40763 770 aa23.37■■□□□ 1.33
FOXN3-211ENST00000555855 TLE2Q04725 743 aa23.37■■□□□ 1.33
FOXN3-211ENST00000555855 C9orf50Q5SZB4 431 aa23.37■■□□□ 1.33
FOXN3-211ENST00000555855 RIOX2Q8IUF8 465 aa23.37■■□□□ 1.33
FOXN3-211ENST00000555855 CDX2Q99626 313 aaPredicted RBP23.37■■□□□ 1.33
FOXN3-211ENST00000555855 TINF2Q9BSI4 451 aa23.37■■□□□ 1.33
FOXN3-211ENST00000555855 GOPCQ9HD26 462 aa23.37■■□□□ 1.33
FOXN3-211ENST00000555855 ADAMTS5Q9UNA0 930 aa23.37■■□□□ 1.33
FOXN3-211ENST00000555855 DIS3Q9Y2L1 958 aaKnown RBP23.37■■□□□ 1.33
FOXN3-211ENST00000555855 MYH8P13535 1937 aa23.36■■□□□ 1.33
FOXN3-211ENST00000555855 DNAH12Q6ZR08 3092 aa23.36■■□□□ 1.33
FOXN3-211ENST00000555855 RAD21O60216 631 aa23.36■■□□□ 1.33
FOXN3-211ENST00000555855 COPB2P35606 906 aa23.36■■□□□ 1.33
FOXN3-211ENST00000555855 SMAD3P84022 425 aaKnown RBP23.36■■□□□ 1.33
FOXN3-211ENST00000555855 SH3RF1Q7Z6J0 888 aa23.36■■□□□ 1.33
FOXN3-211ENST00000555855 PHF24Q9UPV7 400 aa23.36■■□□□ 1.33
FOXN3-211ENST00000555855 TRIM43BA6NCK2 446 aa23.35■■□□□ 1.33
FOXN3-211ENST00000555855 ATP5JP18859 108 aa23.35■■□□□ 1.33
FOXN3-211ENST00000555855 C16orf86Q6ZW13 317 aa23.35■■□□□ 1.33
FOXN3-211ENST00000555855 TRIM43Q96BQ3 446 aaPredicted RBP23.35■■□□□ 1.33
FOXN3-211ENST00000555855 SLC4A4Q9Y6R1 1079 aa23.35■■□□□ 1.33
FOXN3-211ENST00000555855 CYP2D7A0A087X1C5 515 aa23.34■■□□□ 1.33
FOXN3-211ENST00000555855 VWA5AO00534 786 aa23.34■■□□□ 1.33
FOXN3-211ENST00000555855 PGK2P07205 417 aa23.34■■□□□ 1.33
FOXN3-211ENST00000555855 UBE3CQ15386 1083 aa23.34■■□□□ 1.33
FOXN3-211ENST00000555855 SLFNL1Q499Z3 407 aa23.34■■□□□ 1.33
FOXN3-211ENST00000555855 ZSCAN25Q6NSZ9 544 aa23.34■■□□□ 1.33
FOXN3-211ENST00000555855 FBXO28Q9NVF7 368 aa23.34■■□□□ 1.33
FOXN3-211ENST00000555855 CNPY2Q9Y2B0 182 aa23.34■■□□□ 1.33
FOXN3-211ENST00000555855 PGK1P00558 417 aa23.33■■□□□ 1.33
FOXN3-211ENST00000555855 CLTBP09497 229 aa23.33■■□□□ 1.33
FOXN3-211ENST00000555855 RAG1P15918 1043 aa23.33■■□□□ 1.33
FOXN3-211ENST00000555855 ZNF792Q3KQV3 632 aa23.33■■□□□ 1.33
FOXN3-211ENST00000555855 HAUS7Q99871 368 aa23.33■■□□□ 1.33
FOXN3-211ENST00000555855 CHMP4BQ9H444 224 aaKnown RBP23.33■■□□□ 1.33
FOXN3-211ENST00000555855 PPP1R9AQ9ULJ8 1098 aa23.33■■□□□ 1.33
FOXN3-211ENST00000555855 DDX19BQ9UMR2 479 aa23.33■■□□□ 1.33
FOXN3-211ENST00000555855 LTBP2Q14767 1821 aa23.33■■□□□ 1.32
FOXN3-211ENST00000555855 A0A0G2JMZ2 1700 aa23.33■■□□□ 1.32
FOXN3-211ENST00000555855 BAZ2AQ9UIF9 1905 aaKnown RBP23.32■■□□□ 1.32
FOXN3-211ENST00000555855 AKR1A1P14550 325 aa23.32■■□□□ 1.32
FOXN3-211ENST00000555855 FAM83BQ5T0W9 1011 aa23.31■■□□□ 1.32
FOXN3-211ENST00000555855 CTR9Q6PD62 1173 aa23.31■■□□□ 1.32
FOXN3-211ENST00000555855 MAFAQ8NHW3 353 aaPredicted RBP23.31■■□□□ 1.32
FOXN3-211ENST00000555855 DDX11Q96FC9 970 aa23.31■■□□□ 1.32
FOXN3-211ENST00000555855 TSEN34Q9BSV6 310 aaKnown RBP23.31■■□□□ 1.32
FOXN3-211ENST00000555855 TMEM39AQ9NV64 488 aa23.31■■□□□ 1.32
FOXN3-211ENST00000555855 SMIM22K7EJ46 135 aa23.3■■□□□ 1.32
FOXN3-211ENST00000555855 PQBP1O60828 265 aaKnown RBP23.3■■□□□ 1.32
FOXN3-211ENST00000555855 TAL1P17542 331 aaPredicted RBP23.3■■□□□ 1.32
FOXN3-211ENST00000555855 SIRT2Q8IXJ6 389 aa23.3■■□□□ 1.32
FOXN3-211ENST00000555855 MSL3Q8N5Y2 521 aaKnown RBP23.3■■□□□ 1.32
FOXN3-211ENST00000555855 RNPC3Q96LT9 517 aaKnown RBP23.3■■□□□ 1.32
FOXN3-211ENST00000555855 ZBTB40Q9NUA8 1239 aa23.3■■□□□ 1.32
FOXN3-211ENST00000555855 ZNF214Q9UL59 606 aaPredicted RBP23.3■■□□□ 1.32
FOXN3-211ENST00000555855 FAM184BQ9ULE4 1060 aa23.3■■□□□ 1.32
FOXN3-211ENST00000555855 CTDP1Q9Y5B0 961 aaPredicted RBP23.3■■□□□ 1.32
FOXN3-211ENST00000555855 A0A1W2PQ45 241 aaPredicted RBP23.29■■□□□ 1.32
FOXN3-211ENST00000555855 A0A1W2PQY0 241 aa23.29■■□□□ 1.32
FOXN3-211ENST00000555855 DCDC2CA8MYV0 355 aa23.29■■□□□ 1.32
FOXN3-211ENST00000555855 KIAA0355O15063 1070 aa23.29■■□□□ 1.32
FOXN3-211ENST00000555855 ZNF865P0CJ78 1059 aaPredicted RBP23.29■■□□□ 1.32
FOXN3-211ENST00000555855 NUP133Q8WUM0 1156 aa23.29■■□□□ 1.32
FOXN3-211ENST00000555855 MYLIPQ8WY64 445 aa23.29■■□□□ 1.32
FOXN3-211ENST00000555855 MKNK2Q9HBH9 465 aa23.29■■□□□ 1.32
FOXN3-211ENST00000555855 COG6Q9Y2V7 657 aa23.29■■□□□ 1.32
FOXN3-211ENST00000555855 TOX2Q96NM4 488 aa23.28■■□□□ 1.32
FOXN3-211ENST00000555855 SLF1Q9BQI6 1058 aa23.28■■□□□ 1.32
FOXN3-211ENST00000555855 TEX13BQ9BXU2 312 aa23.28■■□□□ 1.32
FOXN3-211ENST00000555855 TTYH1Q9H313 450 aaPredicted RBP23.28■■□□□ 1.32
FOXN3-211ENST00000555855 STARD7Q9NQZ5 370 aa23.28■■□□□ 1.32
FOXN3-211ENST00000555855 ARPP21Q9UBL0 812 aaPredicted RBP23.28■■□□□ 1.32
FOXN3-211ENST00000555855 COL11A1P12107 1806 aaPredicted RBP23.28■■□□□ 1.32
FOXN3-211ENST00000555855 ZBED9Q6R2W3 1325 aa23.28■■□□□ 1.32
FOXN3-211ENST00000555855 TMEM265A0A087WTH1 108 aa23.27■■□□□ 1.32
FOXN3-211ENST00000555855 ITGB8P26012 769 aa23.27■■□□□ 1.32
FOXN3-211ENST00000555855 SLC4A3P48751 1232 aa23.27■■□□□ 1.32
FOXN3-211ENST00000555855 FPGSQ05932 587 aa23.27■■□□□ 1.32
FOXN3-211ENST00000555855 REPS2Q8NFH8 660 aa23.27■■□□□ 1.32
FOXN3-211ENST00000555855 PUS7LQ9H0K6 701 aaKnown RBP23.27■■□□□ 1.32
FOXN3-211ENST00000555855 PLXNA1Q9UIW2 1896 aa23.26■■□□□ 1.31
FOXN3-211ENST00000555855 F5H6K3 240 aa23.26■■□□□ 1.31
FOXN3-211ENST00000555855 ZBED4O75132 1171 aa23.26■■□□□ 1.31
FOXN3-211ENST00000555855 CHGBP05060 677 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms