RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 SPICE1Q8N0Z3 855 aa14.53□□□□□ -0.08
SHMT2-221ENST00000555773 CHURC1Q8WUH1 139 aa14.53□□□□□ -0.08
SHMT2-221ENST00000555773 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
SHMT2-221ENST00000555773 FEM1BQ9UK73 627 aa14.53□□□□□ -0.08
SHMT2-221ENST00000555773 HPS5Q9UPZ3 1129 aa14.53□□□□□ -0.08
SHMT2-221ENST00000555773 MTMR7Q9Y216 660 aa14.53□□□□□ -0.08
SHMT2-221ENST00000555773 GREB1LQ9C091 1923 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-221ENST00000555773 CCL15-CCL14A0A0B4J2E2 113 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 GOLGA8AA7E2F4 631 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L15C9J2P7 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L13C9JLJ4 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L11C9JVI0 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L18D6R9N7 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L22D6RA61 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L17D6RBQ6 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L19D6RCP7 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L20D6RJB6 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 CD2BP2O95400 341 aaKnown RBP14.52□□□□□ -0.09
SHMT2-221ENST00000555773 VCAM1P19320 739 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 HOXA7P31268 230 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-221ENST00000555773 USP17L24Q0WX57 530 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 NOGQ13253 232 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 MOGSQ13724 837 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 CCL15Q16663 113 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 ME3Q16798 604 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 RTN1Q16799 776 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 CPLX2Q6PUV4 134 aaKnown RBP14.52□□□□□ -0.09
SHMT2-221ENST00000555773 GADL1Q6ZQY3 521 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 CATSPERGQ6ZRH7 1159 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 PAXIP1Q6ZW49 1069 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-221ENST00000555773 NOL8Q76FK4 1167 aaKnown RBP14.52□□□□□ -0.09
SHMT2-221ENST00000555773 FAM160B2Q86V87 743 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 TMX3Q96JJ7 454 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 MYL10Q9BUA6 226 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 MAD2L2Q9UI95 211 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 AGTPBP1Q9UPW5 1226 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 SLC45A1Q9Y2W3 748 aa14.52□□□□□ -0.09
SHMT2-221ENST00000555773 NID2Q14112 1375 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 KLRF2D3W0D1 207 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 HSPA6P17066 643 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 SREBF2Q12772 1141 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 MKRN3Q13064 507 aaKnown RBP14.51□□□□□ -0.09
SHMT2-221ENST00000555773 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 FAM83BQ5T0W9 1011 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 CYP4F22Q6NT55 531 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 BTNL9Q6UXG8 535 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 ANKRD23Q86SG2 305 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 HSCBQ8IWL3 235 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 BRI3BPQ8WY22 251 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 CAPNS2Q96L46 248 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 RPAP3Q9H6T3 665 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-221ENST00000555773 FAM217BQ9NTX9 383 aaPredicted RBP14.51□□□□□ -0.09
SHMT2-221ENST00000555773 HOXC10Q9NYD6 342 aa14.51□□□□□ -0.09
SHMT2-221ENST00000555773 DOCK1Q14185 1865 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 TMEM232C9JQI7 657 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 K7ELQ4 463 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-221ENST00000555773 CPLX1O14810 134 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 FDX1P10109 184 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 RXRAP19793 462 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 OSBPP22059 807 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 ADD1P35611 737 aaKnown RBP14.5□□□□□ -0.09
SHMT2-221ENST00000555773 MAP2K2P36507 400 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 TM4SF4P48230 202 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 CCT2P78371 535 aaKnown RBP14.5□□□□□ -0.09
SHMT2-221ENST00000555773 SCRN1Q12765 414 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 STK3Q13188 491 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 BECN1Q14457 450 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 COG2Q14746 738 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 OTUD7BQ6GQQ9 843 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 GPAT2Q6NUI2 795 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 KCTD1Q719H9 257 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 CCDC144CPQ8IYA2 1237 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 PRPF38AQ8NAV1 312 aaKnown RBP14.5□□□□□ -0.09
SHMT2-221ENST00000555773 GTF3C6Q969F1 213 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 NUP88Q99567 741 aaPredicted RBP14.5□□□□□ -0.09
SHMT2-221ENST00000555773 ZCCHC17Q9NP64 241 aaKnown RBP14.5□□□□□ -0.09
SHMT2-221ENST00000555773 GPCPD1Q9NPB8 672 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 MYH8P13535 1937 aa14.5□□□□□ -0.09
SHMT2-221ENST00000555773 FRMPD2Q68DX3 1309 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-221ENST00000555773 BTBD19C9JJ37 291 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 CDKL5O76039 1030 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 CDC27P30260 824 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 ANP32AP39687 249 aaKnown RBP14.49□□□□□ -0.09
SHMT2-221ENST00000555773 STAT2P52630 851 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 KIF23Q02241 960 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-221ENST00000555773 DGKZQ13574 1117 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 TMTC3Q6ZXV5 915 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 RAB11FIP4Q86YS3 637 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 STAG2Q8N3U4 1231 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 LLPHQ9BRT6 129 aaKnown RBP14.49□□□□□ -0.09
SHMT2-221ENST00000555773 TANGO6Q9C0B7 1094 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 PNMA3Q9UL41 463 aa14.49□□□□□ -0.09
SHMT2-221ENST00000555773 ISY1Q9ULR0 285 aaKnown RBP14.49□□□□□ -0.09
SHMT2-221ENST00000555773 RBM19Q9Y4C8 960 aaKnown RBP14.49□□□□□ -0.09
SHMT2-221ENST00000555773 MYPNQ86TC9 1320 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 WDR33Q9C0J8 1336 aaKnown RBP14.48□□□□□ -0.09
SHMT2-221ENST00000555773 FLOT1O75955 427 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 LARGE1O95461 756 aa14.48□□□□□ -0.09
SHMT2-221ENST00000555773 IFNAR1P17181 557 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms