RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 NEDD1Q8NHV4 660 aa11.4□□□□□ -0.58
ACTN1-215ENST00000555616 NKX2-3Q8TAU0 364 aa11.4□□□□□ -0.58
ACTN1-215ENST00000555616 TRIB2Q92519 343 aa11.4□□□□□ -0.58
ACTN1-215ENST00000555616 CEP95Q96GE4 821 aa11.4□□□□□ -0.58
ACTN1-215ENST00000555616 APBA2Q99767 749 aa11.4□□□□□ -0.58
ACTN1-215ENST00000555616 NUDT12Q9BQG2 462 aa11.4□□□□□ -0.58
ACTN1-215ENST00000555616 UNC93B1Q9H1C4 597 aa11.4□□□□□ -0.58
ACTN1-215ENST00000555616 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
ACTN1-215ENST00000555616 PARP14Q460N5 1801 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 MKI67P46013 3256 aaKnown RBP11.39□□□□□ -0.59
ACTN1-215ENST00000555616 FGRP09769 529 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 TSPY3P0CV98 308 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 TSPY8P0CW00 308 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 RGS2P41220 211 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 MAP3K21Q5TCX8 1036 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 CCAR1Q8IX12 1150 aaKnown RBP11.39□□□□□ -0.59
ACTN1-215ENST00000555616 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
ACTN1-215ENST00000555616 ZNF444Q8N0Y2 327 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-215ENST00000555616 SHCBP1Q8NEM2 672 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 MKL1Q969V6 931 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 ATG4CQ96DT6 458 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 MOV10L1Q9BXT6 1211 aaKnown RBP11.39□□□□□ -0.59
ACTN1-215ENST00000555616 SPATC1LQ9H0A9 340 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 RNF208Q9H0X6 261 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 PAK6Q9NQU5 681 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-215ENST00000555616 ADAMTS5Q9UNA0 930 aa11.39□□□□□ -0.59
ACTN1-215ENST00000555616 SLC15A5A6NIM6 579 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 F5H6K3 240 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 ORC4O43929 436 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 TTLL1O95922 423 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 NDUFB10O96000 172 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 FGAP02671 866 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 HOXC6P09630 235 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 HSPD1P10809 573 aaKnown RBP11.38□□□□□ -0.59
ACTN1-215ENST00000555616 ZKSCAN1P17029 563 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-215ENST00000555616 PTPREP23469 700 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 CTDSPL2Q05D32 466 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 KLRC3Q07444 240 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 MAP2K5Q13163 448 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 GRB14Q14449 540 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 FAM83BQ5T0W9 1011 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 UBE2Q1Q7Z7E8 422 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 GMCL1P1Q8NEA9 526 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 U2AF1L4Q8WU68 220 aaKnown RBP11.38□□□□□ -0.59
ACTN1-215ENST00000555616 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 FBXO28Q9NVF7 368 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 PPP1R9AQ9ULJ8 1098 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 TACC3Q9Y6A5 838 aa11.38□□□□□ -0.59
ACTN1-215ENST00000555616 VWA5AO00534 786 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 EPB41L2O43491 1005 aaKnown RBP11.37□□□□□ -0.59
ACTN1-215ENST00000555616 CAPN2P17655 700 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 CYP2B6P20813 491 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 NOVP48745 357 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 TFAP4Q01664 338 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 FAM47AQ5JRC9 791 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 PPP4R3BQ5MIZ7 849 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 LRRC47Q8N1G4 583 aaKnown RBP11.37□□□□□ -0.59
ACTN1-215ENST00000555616 REPS2Q8NFH8 660 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 NUP88Q99567 741 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-215ENST00000555616 SLF1Q9BQI6 1058 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.37□□□□□ -0.59
ACTN1-215ENST00000555616 MROH8Q9H579 483 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 CWC22Q9HCG8 908 aaKnown RBP11.37□□□□□ -0.59
ACTN1-215ENST00000555616 CLIP2Q9UDT6 1046 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 IVNS1ABPQ9Y6Y0 642 aa11.37□□□□□ -0.59
ACTN1-215ENST00000555616 TSPY2A6NKD2 308 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 RAD21O60216 631 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 SGPL1O95470 568 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 IGHA2P01877 340 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
ACTN1-215ENST00000555616 ERCC3P19447 782 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 TRIM32Q13049 653 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 CCL14Q16627 93 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 WDR78Q5VTH9 848 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 ABRAQ8N0Z2 381 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 DEFB118Q96PH6 123 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 ZNF214Q9UL59 606 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-215ENST00000555616 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
ACTN1-215ENST00000555616 LAMA4Q16363 1823 aa11.36□□□□□ -0.59
ACTN1-215ENST00000555616 RPTORQ8N122 1335 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 DOCK3Q8IZD9 2030 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 STRNO43815 780 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 SEC24BO95487 1268 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 SLC25A27O95847 323 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
ACTN1-215ENST00000555616 MCCP23508 829 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 COPB2P35606 906 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 RIOX2Q8IUF8 465 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 TBC1D10CQ8IV04 446 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 STAG1Q8WVM7 1258 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-215ENST00000555616 INCENPQ9NQS7 918 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 IL17RBQ9NRM6 502 aa11.35□□□□□ -0.59
ACTN1-215ENST00000555616 ATP2A1O14983 1001 aa11.34□□□□□ -0.59
ACTN1-215ENST00000555616 RANBP6O60518 1105 aaKnown RBP11.34□□□□□ -0.59
ACTN1-215ENST00000555616 NMT2O60551 498 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms