RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 DSG3P32926 999 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 FLT3LGP49771 235 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 TRDNQ13061 729 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 IKQ13123 557 aaPredicted RBP14.27□□□□□ -0.13
SRP54-206ENST00000555317 SLFN13Q68D06 897 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 SOCS4Q8WXH5 440 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 NUP88Q99567 741 aaPredicted RBP14.27□□□□□ -0.13
SRP54-206ENST00000555317 SLF1Q9BQI6 1058 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 KRT23Q9C075 422 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 PARP14Q460N5 1801 aa14.27□□□□□ -0.13
SRP54-206ENST00000555317 NEDD4P46934 1319 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 ADCY3O60266 1144 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 PEX10O60683 326 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 GRK4P32298 578 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 SLC1A4P43007 532 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 SOX10P56693 466 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 CCDC178Q5BJE1 867 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 PLEKHH3Q7Z736 793 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 IQCA1Q86XH1 822 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 SH3TC2Q8TF17 1288 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 ARMC5Q96C12 935 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 NUDT12Q9BQG2 462 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 TMEM106CQ9BVX2 250 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 NBPF3Q9H094 633 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 IL25Q9H293 177 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 FEM1BQ9UK73 627 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 PPP1R9AQ9ULJ8 1098 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 GABRQQ9UN88 632 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 MTMR7Q9Y216 660 aa14.26□□□□□ -0.13
SRP54-206ENST00000555317 RLFQ13129 1914 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 A0A0G2JMZ2 1700 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 KDM4AO75164 1064 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 CDC45O75419 566 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 CNMDO75829 334 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 TOP1P11387 765 aaKnown RBP14.25□□□□□ -0.13
SRP54-206ENST00000555317 BMP3P12645 472 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 UBXN2AP68543 259 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 IRF5Q13568 498 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 CCDC96Q2M329 555 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 Q3C1V9 767 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 GPR142Q7Z601 462 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 UBAC1Q9BSL1 405 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 SPATC1LQ9H0A9 340 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 PORCNQ9H237 461 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 IL17RBQ9NRM6 502 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 TCP11L1Q9NUJ3 509 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 FBXO28Q9NVF7 368 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 BTBD7Q9P203 1132 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 TACC3Q9Y6A5 838 aa14.25□□□□□ -0.13
SRP54-206ENST00000555317 COL11A1P12107 1806 aaPredicted RBP14.25□□□□□ -0.13
SRP54-206ENST00000555317 B4E1Z4 1266 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 ZBED4O75132 1171 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 MYCP01106 439 aaPredicted RBP14.24□□□□□ -0.13
SRP54-206ENST00000555317 MCCP23508 829 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 RGS2P41220 211 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 STAT2P52630 851 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 PTH1RQ03431 593 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 RALYLQ86SE5 291 aaKnown RBP14.24□□□□□ -0.13
SRP54-206ENST00000555317 NCAPG2Q86XI2 1143 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 PRPF38AQ8NAV1 312 aaKnown RBP14.24□□□□□ -0.13
SRP54-206ENST00000555317 KIFC2Q96AC6 838 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 CHMP4CQ96CF2 233 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 GMCL1Q96IK5 515 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 ZNF333Q96JL9 665 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 ESYT1Q9BSJ8 1104 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 ANO2Q9NQ90 1003 aa14.24□□□□□ -0.13
SRP54-206ENST00000555317 PLXNB2O15031 1838 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 TMEM232C9JQI7 657 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 VWA5AO00534 786 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 COPB2P35606 906 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 FAM160B2Q86V87 743 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 PXYLP1Q8TE99 480 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 CHURC1Q8WUH1 139 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 DCAF4Q8WV16 495 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 TTC14Q96N46 770 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 MOV10L1Q9BXT6 1211 aaKnown RBP14.23□□□□□ -0.13
SRP54-206ENST00000555317 MROH8Q9H579 483 aa14.23□□□□□ -0.13
SRP54-206ENST00000555317 SLC15A5A6NIM6 579 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 SLC25A27O95847 323 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 ELNP15502 786 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 ERCC3P19447 782 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 CYP2B6P20813 491 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 POTEEQ6S8J3 1075 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 TRMT44Q8IYL2 757 aaKnown RBP14.22□□□□□ -0.13
SRP54-206ENST00000555317 SHCBP1Q8NEM2 672 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 ZSCAN10Q96SZ4 725 aaPredicted RBP14.22□□□□□ -0.13
SRP54-206ENST00000555317 APBA2Q99767 749 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 TMEM47Q9BQJ4 181 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 ZKSCAN3Q9BRR0 538 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 KAT14Q9H8E8 782 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 SLC5A4Q9NY91 659 aa14.22□□□□□ -0.13
SRP54-206ENST00000555317 RBM8AQ9Y5S9 174 aaKnown RBP14.22□□□□□ -0.13
SRP54-206ENST00000555317 ERICH2A1L162 156 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 STRNO43815 780 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 HMGCRP04035 888 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 INHAP05111 366 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 CYP21A2P08686 494 aa14.21□□□□□ -0.13
SRP54-206ENST00000555317 FDX1P10109 184 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms