RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 FOCADQ5VW36 1801 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 IGF2BP3O00425 579 aaKnown RBP eCLIP20.49■□□□□ 0.87
PSEN1-212ENST00000555254 TOP1P11387 765 aaKnown RBP20.49■□□□□ 0.87
PSEN1-212ENST00000555254 KIF5BP33176 963 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 RAB3GAP1Q15042 981 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 CCDC144CPQ8IYA2 1237 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 SMARCC2Q8TAQ2 1214 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 DDX11Q96FC9 970 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 MYL10Q9BUA6 226 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 MCOLN1Q9GZU1 580 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 CABP5Q9NP86 173 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 IL17RBQ9NRM6 502 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 SAGE1Q9NXZ1 904 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 STX8Q9UNK0 236 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 CDK5RAP2Q96SN8 1893 aa20.49■□□□□ 0.87
PSEN1-212ENST00000555254 TRIM75PA6NK02 468 aa20.48■□□□□ 0.87
PSEN1-212ENST00000555254 JAK2O60674 1132 aa20.48■□□□□ 0.87
PSEN1-212ENST00000555254 AKR1B1P15121 316 aa20.48■□□□□ 0.87
PSEN1-212ENST00000555254 RXRAP19793 462 aa20.48■□□□□ 0.87
PSEN1-212ENST00000555254 JAG1P78504 1218 aa20.48■□□□□ 0.87
PSEN1-212ENST00000555254 SSRP1Q08945 709 aaKnown RBP20.48■□□□□ 0.87
PSEN1-212ENST00000555254 SHROOM1Q2M3G4 852 aaPredicted RBP20.48■□□□□ 0.87
PSEN1-212ENST00000555254 OTOFQ9HC10 1997 aa20.48■□□□□ 0.87
PSEN1-212ENST00000555254 DDX60LQ5H9U9 1706 aaKnown RBP20.47■□□□□ 0.87
PSEN1-212ENST00000555254 TESPA1A2RU30 521 aaPredicted RBP20.47■□□□□ 0.87
PSEN1-212ENST00000555254 H3BQV1 296 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 STX6O43752 255 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 ALDH1A1P00352 501 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 SYT1P21579 422 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 ADD1P35611 737 aaKnown RBP20.47■□□□□ 0.87
PSEN1-212ENST00000555254 GNAQP50148 359 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 AKAP17AQ02040 695 aaKnown RBP20.47■□□□□ 0.87
PSEN1-212ENST00000555254 TATDN1Q6P1N9 297 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 TRIM22Q8IYM9 498 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 PNMA1Q8ND90 353 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 WASF1Q92558 559 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 GBP4Q96PP9 640 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 MAP3K14Q99558 947 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 ORC3Q9UBD5 711 aaPredicted RBP20.47■□□□□ 0.87
PSEN1-212ENST00000555254 AFG3L2Q9Y4W6 797 aa20.47■□□□□ 0.87
PSEN1-212ENST00000555254 PLIN4Q96Q06 1357 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 USP17L5A8MUK1 530 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 CTDNEP1O95476 244 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 GH2P01242 217 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 SPP2Q13103 211 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 ABCB5Q2M3G0 1257 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 RCSD1Q6JBY9 416 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 CEP95Q96GE4 821 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 TMEM47Q9BQJ4 181 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 MTMR4Q9NYA4 1195 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 KCNH4Q9UQ05 1017 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 NID2Q14112 1375 aa20.46■□□□□ 0.87
PSEN1-212ENST00000555254 CXCL11O14625 94 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 BRD1O95696 1058 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 TTLL1O95922 423 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 ASNSP08243 561 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 CDC27P30260 824 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 GADL1Q6ZQY3 521 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 TMEM179Q6ZVK1 233 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 FAM43AQ8N2R8 423 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 R3HDMLQ9H3Y0 253 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 KANSL2Q9H9L4 492 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 ATP6V1DQ9Y5K8 247 aa20.45■□□□□ 0.86
PSEN1-212ENST00000555254 VPS37CA5D8V6 355 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-212ENST00000555254 BTBD19C9JJ37 291 aa20.44■□□□□ 0.86
PSEN1-212ENST00000555254 ZSCAN22P10073 491 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-212ENST00000555254 IFNAR1P17181 557 aa20.44■□□□□ 0.86
PSEN1-212ENST00000555254 ATP2B2Q01814 1243 aa20.44■□□□□ 0.86
PSEN1-212ENST00000555254 TROAPQ12815 778 aa20.44■□□□□ 0.86
PSEN1-212ENST00000555254 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-212ENST00000555254 ZNF280CQ8ND82 737 aa20.44■□□□□ 0.86
PSEN1-212ENST00000555254 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-212ENST00000555254 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
PSEN1-212ENST00000555254 AS3MTQ9HBK9 375 aa20.44■□□□□ 0.86
PSEN1-212ENST00000555254 CLIP2Q9UDT6 1046 aa20.44■□□□□ 0.86
PSEN1-212ENST00000555254 ZBTB21Q9ULJ3 1066 aa20.44■□□□□ 0.86
PSEN1-212ENST00000555254 IGKV6D-41A0A0C4DH26 115 aa20.43■□□□□ 0.86
PSEN1-212ENST00000555254 PRPF38BQ5VTL8 546 aaKnown RBP20.43■□□□□ 0.86
PSEN1-212ENST00000555254 LZTS2Q9BRK4 669 aa20.43■□□□□ 0.86
PSEN1-212ENST00000555254 SLC26A6Q9BXS9 759 aa20.43■□□□□ 0.86
PSEN1-212ENST00000555254 FAM217BQ9NTX9 383 aaPredicted RBP20.43■□□□□ 0.86
PSEN1-212ENST00000555254 A0A0G2JLL6 359 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-212ENST00000555254 FMNL1O95466 1100 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-212ENST00000555254 CRHR2Q13324 411 aa20.42■□□□□ 0.86
PSEN1-212ENST00000555254 TRIM29Q14134 588 aa20.42■□□□□ 0.86
PSEN1-212ENST00000555254 GRM4Q14833 912 aa20.42■□□□□ 0.86
PSEN1-212ENST00000555254 TAF1CQ15572 869 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-212ENST00000555254 FASTKD5Q7L8L6 764 aaKnown RBP20.42■□□□□ 0.86
PSEN1-212ENST00000555254 PRRT2Q7Z6L0 340 aaPredicted RBP20.42■□□□□ 0.86
PSEN1-212ENST00000555254 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.42■□□□□ 0.86
PSEN1-212ENST00000555254 GINM1Q9NU53 330 aa20.42■□□□□ 0.86
PSEN1-212ENST00000555254 STK36Q9NRP7 1315 aa20.42■□□□□ 0.86
PSEN1-212ENST00000555254 PDHXO00330 501 aa20.41■□□□□ 0.86
PSEN1-212ENST00000555254 DTNBO60941 627 aa20.41■□□□□ 0.86
PSEN1-212ENST00000555254 NOVP48745 357 aa20.41■□□□□ 0.86
PSEN1-212ENST00000555254 MOGSQ13724 837 aa20.41■□□□□ 0.86
PSEN1-212ENST00000555254 PKP1Q13835 747 aa20.41■□□□□ 0.86
PSEN1-212ENST00000555254 C8orf76Q96K31 380 aa20.41■□□□□ 0.86
PSEN1-212ENST00000555254 NYAP2Q9P242 653 aa20.41■□□□□ 0.86
PSEN1-212ENST00000555254 MTMR7Q9Y216 660 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms